Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20leycettanus_20[genbank_20GCA_5F000787455.1_202014-11- 26] 991 sequences; 25,946,254 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq171 109 1e-18 seq404 89.7 1e-12 >seq171 Length=28483 Score = 109 bits (120), Expect = 1e-18 Identities = 307/464 (66%), Gaps = 12/464 (3%) Strand=Plus/Plus Query 243296 AGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCG-CC 243354 |||||||||| |||| | | || || ||||| | || ||||| || ||| || Sbjct 1914 AGCGTCTCGTTGCCTTCGCGGCGGTCGAGGGTATCTTCTTCTCCGGCTCCTT-TGCTTCC 1972 Query 243355 ATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATC 243414 || || |||||| ||| ||| | ||||| || ||| | | || |||||| ||||| Sbjct 1973 ATTTTCTGGCTGAAGAAGCGCGGTCTCATGCCCGGTCTCACTTTCTCCAACGAGCTCATC 2032 Query 243415 AGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAGCTCCAGAAC 243474 ||| |||||||| |||||| | || | | || | | || | ||| ||| Sbjct 2033 TCTCGTGACGAGGGTCTTCACACTGACTTTGCTTGCCTGCTTTTCTCTCACCTC---AAC 2089 Query 243475 AAGCTACC--ATTCGAA-ACGGTCAAACAAATCATCACAGAAGCAGTTGAAAACGAAAAG 243531 || | || || || | || || | |||||| || || |||| | || | Sbjct 2090 AACCGCCCTGATAAGAGGATCGTTGAAGACATCATCGTTGAGGCTGTTGCCATTGAGCAA 2149 Query 243532 GAATTCATTTGCGACGCTATTCCA--TGCCGGCTTATTGGCATGAACTCTGAACTCATGG 243589 || ||| || || ||| |||| ||| || ||||||||||| | | |||||| Sbjct 2150 GAGTTCCTTACTGATGCTCTTCCCGTTGCA--CTCCTTGGCATGAACGCCAAGCTCATGT 2207 Query 243590 GACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGT 243649 | ||||||||||| |||||||||||||| || | | || || || | |||| | Sbjct 2208 GCCAGTACATCGAGTTCGTAGCCGACCGTCTTCTGGTTGCTCTCGGCAACAAGAAGTACT 2267 Query 243650 ACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACT 243709 |||| || |||||||| | ||| |||||| ||||| || || || || |||| Sbjct 2268 TCAACGTCACAAACCCCTTCGACTTCATGGAGTCTATTTCTCTGGCTGGCAAGACCAACT 2327 Query 243710 TCTTCGAAAAGCGTGTCAGTGATTATCAACGCCCTGGTGTGATG 243753 ||||||| ||||||||| |||| || || ||||||| ||| Sbjct 2328 TCTTCGAGAAGCGTGTCGGTGACTACCAGAAGGCTGGTGTCATG 2371 >seq404 Length=28556 Score = 89.7 bits (98), Expect = 1e-12 Identities = 139/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 333795 GTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTA 333854 ||||| || | || ||||| || |||||||| ||||||| || | | ||| | Sbjct 24217 GTGCAGACCTCATCAAGGAATCCAGAGTCGTGACTGACAATCAAGCTGGTGATGTCGGTG 24276 Query 333855 AGGTTGATCAGGTATTCAATCAGCCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGC 333914 | || ||| ||| || ||||||| ||||||| | ||| | ||||| ||||| Sbjct 24277 TGCTTCTTCAAGTACTCCTGCAGCCACTTCACGTTCGCAACATCCAAGTGGTTAGTCGGT 24336 Query 333915 TCGTCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATT 333974 |||||||| || | | | || |||| ||||||||||| || || || | |||||| Sbjct 24337 TCGTCAAGGAGCAACACGTCCGCCTTCATAAGCATTGCACGAGCGAGCGCCAATTTCATC 24396 Query 333975 TTCCACCCTCCTGAAAGAG 333993 ||||| || || ||||||| Sbjct 24397 TTCCAGCCACCCGAAAGAG 24415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102865996525850