Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20leycettanus_20[genbank_20GCA_5F000787455.1_202014-11- 26] 991 sequences; 25,946,254 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq171 145 8e-30 seq381 96.9 3e-15 seq260 95.1 1e-14 seq547 82.4 8e-11 >seq171 Length=28483 Score = 145 bits (160), Expect = 8e-30 Identities = 352/524 (67%), Gaps = 27/524 (5%) Strand=Plus/Plus Query 52326 GTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGAT-CGAGAGCGACACCGC 52384 || || ||| ||||||| ||||| ||||||| || ||||| | ||| | | | Sbjct 1844 GTCCCCTGCATTCGCAAGAAGGCCGAGTGGGCCATCCGTTGGATTCAAGA-CAAGGAGTC 1902 Query 52385 CACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAG 52444 || | | | |||| | || |||||||| |||||||| | || || |||||| Sbjct 1903 TACCTTTGGCCAGCGTCTCGTTGCCTTCGCGGCGGTCGAGGGTATCTTCTTCTCCGGCTC 1962 Query 52445 CTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAA 52504 |||||| |||| || | | || | | || | |||||||| || || ||| ||| Sbjct 1963 CTTTGCTTCCATTTTCTGGCTGAAGAAGCGCGGTCTCATGCCCGGTCTCACTTTCTCCAA 2022 Query 52505 CGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCT--------CT-A 52555 |||| | || || || ||||| || || ||||| |||||||| ||||| || | Sbjct 2023 CGAGCTCATCTCTCGTGACGAGGGTCTTCACACTGACTTTGCTTGCCTGCTTTTCTCTCA 2082 Query 52556 CTACAAGACGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGA 52615 | ||| | ||| || | || |||| || | || ||| || || Sbjct 2083 CCTCAACAACCGC----CCTGATAAGAGGAT-------CGTTGAAGA-CATCATCGTTGA 2130 Query 52616 GGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCAT 52675 ||| || || || || | ||||| |||| | || || || || | || || ||||| Sbjct 2131 GGCTGTTGCCATTGAGCAAGAGTTCCTTACTGATGCTCTTCCCGTTGCACTCCTTGGCAT 2190 Query 52676 GAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCT 52735 |||||| || ||||||| ||||||||||||| || || || ||||| |||| || Sbjct 2191 GAACGCCAAGCTCATGTGCCAGTACATCGAGTTCGTAGCCGACCGTCTTCTGGTTGCTCT 2250 Query 52736 CGGGCAGCCA-AAGTACTTCAACGCTCGC-AATCCGTTTGAGTTTATGAACAACATTTCG 52793 | |||| | | ||||||||||||| || | || || || || || ||| | ||||| Sbjct 2251 C-GGCAACAAGAAGTACTTCAACG-TCACAAACCCCTTCGACTTCATGGAGTCTATTTCT 2308 Query 52794 CTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 || | |||||||||||||| ||||||||||| ||||| || || Sbjct 2309 CTGGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTA 2352 >seq381 Length=79381 Score = 96.9 bits (106), Expect = 3e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||||||| ||| || |||||||| ||||| |||| ||| Sbjct 61625 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGTTTTCCGGCGAAGA 61684 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTT 138544 | | |||||| ||||| || || || || || ||||| ||| || || | | | Sbjct 61685 TCAAACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGT 61744 Query 138545 CCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAA 138604 | | ||||||| ||||||| || |||| || | || ||||| ||||| || || || | Sbjct 61745 CGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 61804 Query 138605 A 138605 | Sbjct 61805 A 61805 >seq260 Length=52326 Score = 95.1 bits (104), Expect = 1e-14 Identities = 140/196 (71%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| |||||||||||||| || ||| || ||||| || || ||||| | Sbjct 28357 GATTCCTTCTGAATGTTGTAGTCCGACAGAGTGCGGCCATCCTCCAGCTGCTTACCAGCG 28416 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| || ||||| ||||| || || || || || ||||| ||| || || | | Sbjct 28417 AAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTCACA 28476 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | || |||| ||||||||||||| || | ||| || || || ||||| || Sbjct 28477 TTG-TCGATAGTATCGGAAGACTCCACCTCGAGAGTGATCGTCTTGCCGGTGAGAGTCTT 28535 Query 138600 TACAAAAATCTGCATG 138615 || || ||||||||| Sbjct 28536 GACGAAGATCTGCATG 28551 Score = 82.4 bits (90), Expect = 8e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||| | || | | | || || |||||||||||||||||| | Sbjct 28096 CCACCGCGGAGACGAAGAACAAGGTGAAGGGTCGATTCTTTTTGAATGTTGTAGTCGGAC 28155 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| || || | || || || | | || |||||||| ||||| ||||| Sbjct 28156 AAGGTACGACCATCTTCCAACTGCTTGCCAGCGAAAATAAGACGCTGCTGGTCGGGAGGG 28215 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||| || || | |||| || | || |||| ||||| || Sbjct 28216 ATTCCCTCCTTGTCTTGGATCTTGGACTTCACATTG-TCGATAGTATCGGAAGACTCAAC 28274 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||||| || | || || || || || || || ||||| ||||||||| Sbjct 28275 CTCGAGGGTGATTGTCTTGCCGGTGAGGGTCTTAACAAAGATCTGCATG 28323 >seq547 Length=32544 Score = 82.4 bits (90), Expect = 8e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 153030 TTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAGGT 153089 ||||| ||||| || ||||| || | || || | | |||| | |||| ||| | || Sbjct 30291 TTGACAACTTGGAATTCGCCAGCAAGGACACGGCGCGAATAAATATTGGAAGTATATGGC 30232 Query 153090 TCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCACC 153149 |||||| ||||||| ||| || ||||| ||| |||| || ||||| ||||| Sbjct 30231 TCAAAGCATTCGTTGAAGCCGAGGATTTGGCTAGTGCTTGCAGTGGGCATAGGAGCCACG 30172 Query 153150 AACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATCCCAC 153209 | |||| || || | |||||| | ||| | |||||| ||| | ||| ||||| Sbjct 30171 AGCAAACTGTTGCGTACACCGTGCTGTGCAATCTTCGCCTTCAGCGCGTCCCAGTCCCAG 30112 Query 153210 AGCGCCGACGGTGTCGCGTTCCACATGTCGTACTG 153244 || | | ||||| | ||||||||||||||| Sbjct 30111 AGGTCAGTGGGTGTTCTATCCCACATGTCGTACTG 30077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496256252549520