Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20leycettanus_20[genbank_20GCA_5F000787455.1_202014-11- 26] 991 sequences; 25,946,254 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq260 89.7 5e-13 >seq260 Length=52326 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | || || || || ||||| |||||||| || || || || || Sbjct 28321 ATGCCACCACGGAGACGCAGGACCAGGTGAAGCGTAGATTCCTTCTGAATGTTGTAGTCC 28380 Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 ||| | | | ||| |||| || || || ||| | |||| || |||||||| | Sbjct 28381 --GACAGAGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCAG 28438 Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288 | || ||||| || || || || || || || | || | || |||||||||| Sbjct 28439 GGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATAGTATCGGAAGACT 28498 Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | || |||||||| | ||| |||||||| ||||| || || || || ||||| Sbjct 28499 CCACCTCGAGAGTGATCGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 28550 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || |||||||| | | || || || || || ||||| ||||| || || || ||| Sbjct 28093 ATACCACCGCGGAGACGAAGAACAAGGTGAAGGGTCGATTCTTTTTGAATGTTGTAGTCG 28152 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| | ||| ||||| || || || ||| | || | || |||||||| || Sbjct 28153 GACAAGGTACGACCATCTTCCAACTGCTTGCCAGCGAAAATAAGACGCTGCTGGTCGGGA 28212 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || || || || || ||||| || || || | || | || ||||||||||| Sbjct 28213 GGGATTCCCTCCTTGTCTTGGATCTTGGACTTCACATTGTCGATAGTATCGGAAGACTCA 28272 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || ||||| || | || |||||||| || || || ||||| || ||||| Sbjct 28273 ACCTCGAGGGTGATTGTCTTGCCGGTGAGGGTCTTAACAAAGATCTGCAT 28322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451997600810360