Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20leycettanus_20[genbank_20GCA_5F000787455.1_202014-11- 26] 991 sequences; 25,946,254 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq171 141 9e-29 seq381 114 1e-20 seq260 105 7e-18 seq655 86.0 6e-12 >seq171 Length=28483 Score = 141 bits (156), Expect = 9e-29 Identities = 327/482 (68%), Gaps = 12/482 (2%) Strand=Plus/Minus Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684 ||||| || || || || || || ||| ||||| | ||| || || |||||||| Sbjct 2337 TTCTCGAAGAAGTTGGTCTTGCCAGCCAGAGAAATAGACTCCATGAAGTCGAAGGGGTTT 2278 Query 132685 GCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAAC 132741 | |||| ||| ||| | |||||| || | || || || | |||||| |||||| Sbjct 2277 GTGACGTTGAAGTACTTCTTGTTGCCGAG-AG--CAACCAGAAGACGGTCGGCTACGAAC 2221 Query 132742 TCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTC 132800 |||||||| || ||||| | || || | | | || || || || || || || || Sbjct 2220 TCGATGTACTGGCACATGAGCTTGGCGTTCATG-CCAAGGAGTGCAACGGGAAGAGCATC 2162 Query 132801 GGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGC 132860 || || || |||||| ||||| || || || || ||| || |||| | | Sbjct 2161 AGTAAGGAACTCTTGCTCAATGGCAACAGCCTCAACGATGATGTCTTCAACGATCCTCTT 2102 Query 132861 G-CTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCT 132919 | ||| |||| | || ||| | || |||||||||||| || | |||| Sbjct 2101 ATCAGGGCGGTTGTTG-AGGTGAGAGAAAAGCAGGCAAGCAAAGTCAGTGTGAAGACCCT 2043 Query 132920 CGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGA 132979 |||| | || ||||| |||||| |||||| | ||||||||||| ||||| || || | Sbjct 2042 CGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCGGGCATGAGACCGCGCTTCTTCA 1983 Query 132980 GCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCA 133039 |||| || |||| || || ||| || ||||||| |||||||| |||||||| || | Sbjct 1982 GCCAGAAAATGGAAGCAAAGGAGCCGGAGAAGAAGATACCCTCGACCGCCGCGAAGGCAA 1923 Query 133040 CCAGGCGCTCGCCGAACGT-GGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCC 133098 | || |||| ||| || || | || ||| || | ||||| || | ||||| |||||| Sbjct 1922 CGAGACGCTGGCCAAAGGTAGACTCCTTGTCTTG-AATCCAACGGATGGCCCACTCGGCC 1864 Query 133099 TT 133100 || Sbjct 1863 TT 1862 Score = 138 bits (152), Expect = 1e-27 Identities = 198/276 (72%), Gaps = 5/276 (2%) Strand=Plus/Minus Query 133168 TAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAG 133227 || ||||||||||| || || | || ||||| | ||||||||| ||| || ||| Sbjct 1738 TATGTGTCGATGAGCAGAGAGTAAGTCTCAGAGTGGATGTTCTCCATCATGATCTGGAAG 1679 Query 133228 CCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAA-CGCTCGACCAGATT 133286 || || ||||| || || || | ||| | |||| || ||| ||||| ||||| || Sbjct 1678 CCATAGAAGCAACGAGCTTCAGGGATCTGAATTTCTCC-GCTAAAGCGCTCCACCAGGTT 1620 Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346 || ||||||||||||||| |||||||| ||||| || ||||| |||||| | ||| Sbjct 1619 CTCATTGACGATGCCGTCGGAAGCGGCGAAGAAGGCAAGGACGTGGGAGATGAAGTAGCG 1560 Query 133347 CTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTC 133403 ||||| || |||| || | ||||||| | || || |||||||| | || || Sbjct 1559 CTCGTCATCATTCAGCCGATTATTCCAGTCGTGAAGATCTTTCGACAGGTCAATTTCTTC 1500 Query 133404 GACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 | ||||||| || || || || || || |||||||| Sbjct 1499 GGCGGTCCAGAAAGAAGCTTCAGCCTTCTTGTACAT 1464 >seq381 Length=79381 Score = 114 bits (126), Expect = 1e-20 Identities = 136/182 (75%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || ||||| || ||||| ||| ||||||| ||| | | ||||| | | Sbjct 61805 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGCGACACCATC 61746 Query 38313 CA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCT 38371 | |||| | || | || |||| ||||| ||||| |||||| | ||||| ||||| | Sbjct 61745 GACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAGCAGCGTTT 61687 Query 38372 CATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAA 38431 || | ||| || |||||||| || || | ||||| || | ||||||||||||||| || Sbjct 61686 GATCTTCGCCGGAAAACAGCTCGAGGATGGCCGCACTCTGAGCGACTACAACATCCAGAA 61627 Query 38432 GG 38433 || Sbjct 61626 GG 61625 >seq260 Length=52326 Score = 105 bits (116), Expect = 7e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || ||||| ||||| || |||||| |||| || ||| | || Sbjct 28322 ATGCAGATCTTTGTTAAGACCCTCACCGGCAAGACAATCACCCTCGAGGTTGAGTCTTCC 28263 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | || || |||| ||||| |||||||| || ||||||| Sbjct 28262 GATACTATCGACAATGTGAAGTCCAAGATCCAAGACAAGGAGGGAATCCCTCCCGACCAG 28203 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || |||| ||| ||||| ||| |||| || | || ||| | |||||||||| Sbjct 28202 CAGCGTCTTATTTTCGCTGGCAAGCAGTTGGAAGATGGTCGTACCTTGTCCGACTACAAC 28143 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 || ||||| ||| |||| || || | || || ||| Sbjct 28142 ATTCAAAAAGAATCGACCCTTCACCTTGTTCTTCGT 28107 Score = 105 bits (116), Expect = 7e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| || ||||| |||| || ||| | || Sbjct 28550 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACGATCACTCTCGAGGTGGAGTCTTCC 28491 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | || || |||| ||||| ||||| || ||| | ||||| Sbjct 28490 GATACTATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 28431 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| || || |||||||| || | ||||| || ||||||||| Sbjct 28430 CAGCGCCTGATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGCACTCTGTCGGACTACAAC 28371 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 || || |||||| | ||||| || |||| |||||| Sbjct 28370 ATTCAGAAGGAATCTACGCTTCACCTGGTCCTGCGT 28335 >seq655 Length=54813 Score = 86.0 bits (94), Expect = 6e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| ||||| || ||| ||||||||||||| || || | ||| ||||| ||||| || Sbjct 16183 GACAAGGAGGGTATCCCCCCCGACCAACAGCGTCTGATCTTCGCTGGCAAGCAGCTCGAG 16242 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 |||| || || || |||||||||||||| ||||| | || || || | ||||| Sbjct 16243 GACGGCCGTACTCTTTCTGACTACAACATCCAGAAGGAGTCCACCCTCCACCTCGTGCTC 16302 Query 38457 CG 38458 || Sbjct 16303 CG 16304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500166604109440