Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20leycettanus_20[genbank_20GCA_5F000787455.1_202014-11- 26] 991 sequences; 25,946,254 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq260 154 3e-32 seq547 125 2e-23 seq655 95.1 3e-14 >seq260 Length=52326 Score = 154 bits (170), Expect = 3e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | ||| | ||| ||| || || |||||||| |||| ||| || | || ||||| Sbjct 27885 AACCAAGTGCAAGGTGCTCTCCTTCTGGATATTGTAGTCGGAAAGCGTACGTCCGTCTTC 27944 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||||| |||||||| || || || || || |||||||||||||| |||||||| Sbjct 27945 AAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGAGGAATGCCTTCCTTGTCTTG 28004 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 ||| || ||| ||||| || |||||||| || || || || || | ||||| ||||| Sbjct 28005 AATCTTGCTCTTCACGTTATCGATGGTGTCTGAGCTCTCAACCTCCAAGGTAATAGTCTT 28064 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||| || || ||||| | ||||| Sbjct 28065 GCCGGTCAACGTCTTGACGAAGATCTGCAT 28094 Score = 136 bits (150), Expect = 9e-27 Identities = 141/185 (76%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||| || ||||| || ||||||||||| || | || || | || || || Sbjct 28570 ACAAGGTGAAGGGTAGACTCCTTCTGAATATTGTAGTCAGAGAGGGTACGGCCGTCCTCA 28629 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| | || || ||||||||||||||||| || ||||| || Sbjct 28630 AGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGG 28689 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || |||||||| | |||||| || ||||| | ||||| Sbjct 28690 ATCTTCGACTTGACGTTATCGATGGTGTCGCTAGATTCCACCTCGAGGGTGATGGTCTTG 28749 Query 195112 CCTGT 195116 || || Sbjct 28750 CCGGT 28754 Score = 125 bits (138), Expect = 2e-23 Identities = 156/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTT 194989 |||||||||||| || || ||||||||||| ||||| |||| |||| || | ||||||| Sbjct 28113 AACAAGGTGAAGGGTCGATTCTTTTTGAATGTTGTAGTCGGACAAG-GTACGACCATCTT 28171 Query 194990 CGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTT 195049 | | |||||| || ||||| ||||| || || ||||| ||||| || || || ||||||| Sbjct 28172 CCAACTGCTTGCCAGCGAAAATAAGACGCTGCTGGTCGGGAGGGATTCCCTCCTTGTCTT 28231 Query 195050 GAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCT 195109 | || || ||| || || || || || || ||| || || || ||||| | |||| Sbjct 28232 GGATCTTGGACTTCACATTGTCGATAGTATCGGAAGACTCAACCTCGAGGGTGATTGTCT 28291 Query 195110 TTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | || || | || || || || | ||||| Sbjct 28292 TGCCGGTGAGGGTCTTAACAAAGATCTGCAT 28322 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||| || || || || ||||| ||||| || | ||||| | ||||| || Sbjct 28342 ACCAGGTGAAGCGTAGATTCCTTCTGAATGTTGTAGTCCGACAGAGTGCGGCCATCCTCC 28401 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| |||||||| || || || ||||| || || ||||| || ||||| || Sbjct 28402 AGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 28461 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || || || || || ||| ||||| || || || | |||||| Sbjct 28462 ATCTTGGACTTCACATTGTCGATAGTATCGGAAGACTCCACCTCGAGAGTGATCGTCTTG 28521 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||| || ||||| | ||||| Sbjct 28522 CCGGTGAGAGTCTTGACGAAGATCTGCAT 28550 >seq547 Length=32544 Score = 125 bits (138), Expect = 2e-23 Identities = 119/152 (78%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 160570 GATGAGAGCCAGAGAGATTTTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGT 160629 ||| ||||| | || | |||||||| |||||||| ||||||||||||||||| |||| Sbjct 29283 GATCAGAGCTCGTGACTTGTTCTACGCTCTCTGGACTCCCGATCTTTTCATGAAGCGAGT 29342 Query 160630 GAAAGACAATGGGGATTGGAGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGT 160689 | | ||||| || |||| ||||||||||| |||||||| || || |||| |||||| Sbjct 29343 TGAGGCAAATGGCGACTGGACGCTTTTCTGTCCGAATGAAGCCCCCGGTCTTGCTGATGT 29402 Query 160690 TTATGGTTCCGAGTTCGAGACTCTTTATGAAA 160721 |||||| |||||||| | ||||| |||| Sbjct 29403 CTATGGTGATGAGTTCGATGCCCTTTACGAAA 29434 >seq655 Length=54813 Score = 95.1 bits (104), Expect = 3e-14 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || |||||||| || || || ||||| || | |||||| | || || ||| Sbjct 16298 ACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTACGGCCGTCCTCG 16239 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 |||||||| || |||||||| || || |||||||| || || || || || |||||| Sbjct 16238 AGCTGCTTGCCAGCGAAGATCAGACGCTGTTGGTCGGGGGGGATACCCTCCTTGTCT 16182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109467512704097