Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20leycettanus_20[genbank_20GCA_5F000787455.1_202014-11- 26] 991 sequences; 25,946,254 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq381 86.0 4e-12 seq260 84.2 1e-11 >seq381 Length=79381 Score = 86.0 bits (94), Expect = 4e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 34794 TTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATT 34853 ||||| ||||| ||||| || | || |||| || |||||||||||||| || || Sbjct 61627 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGTTTTCCGGCGAAGATC 61686 Query 34854 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT 34913 | || ||||||||| | || | ||||||||||| ||||| |||||| | Sbjct 61687 AAACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 61746 Query 34914 ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAG 34973 || | || | | |||||| |||| ||| ||||| || ||||| || ||||| || ||| Sbjct 61747 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAAG 61806 >seq260 Length=52326 Score = 84.2 bits (92), Expect = 1e-11 Identities = 148/215 (69%), Gaps = 8/215 (4%) Strand=Plus/Plus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||| | ||||| || ||||| || || ||||| ||||| | ||| | || || Sbjct 27885 AACCAAGTGCAAGGTGCTCTCCTTCTGGATATTGTAGTCGGAAAGCGTACGTCCGTCTTC 27944 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||| || || || || || || || ||||| || | || | || |||||||| Sbjct 27945 AAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGAGGAATGCCTTCCTTGTCTTG 28004 Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGG 34947 |||||| || ||| ||||||| || | |||||| || | ||| || | Sbjct 28005 AATCTTGCTCTTCACGT----TATCGATGGTGTCTGAGCTCTCAACCTCCAAGGTAATAG 28060 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || || || | ||||| || |||||||||||| Sbjct 28061 TCTTGCCGGTCAACGTCTTGACGAAGATCTGCATA 28095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324629679136248