Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20leycettanus_20[genbank_20GCA_5F000787455.1_202014-11- 26] 991 sequences; 25,946,254 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq547 102 9e-17 >seq547 Length=32544 Score = 102 bits (112), Expect = 9e-17 Identities = 352/547 (64%), Gaps = 4/547 (1%) Strand=Plus/Minus Query 48126 TCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGAC 48185 || || ||||| ||||| |||| | | | || || |||||| ||||| | | | | Sbjct 29420 TCGAACTCATCACCATAGACATCAGCAAGACCGGGGGCTTCATTCGGACAGAAAAGCGTC 29361 Query 48186 CAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAAT 48245 || || ||| | |||| |||| || | ||| || |||| ||||| || Sbjct 29360 CAGTCGCCATTTGCCTCAACTCGCTTCATGAAAAGATCGGGAGTCCAGAGAGCGTAGAAC 29301 Query 48246 AAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATT 48305 || || | || ||| | ||||| ||||| |||| | || || | || || | Sbjct 29300 AAGTCACGAGCTCTGATCTCTTCCTTGCCGTGATTCTTACGGAGATCCAAGAACTCGAAA 29241 Query 48306 ATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCT 48365 ||||| |||||||| || || | || || || | |||| || || || || || ||| Sbjct 29240 ATATCGGCATGCCAAGGCTCAAGGTAGATAGCAAAAGCACCCGGACGCTTGTTTCCACCT 29181 Query 48366 TGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGAT 48425 || || | |||||| ||||| ||||| |||||| | ||| || | |||||||| || Sbjct 29180 TGGTCGACATATCTCGCAGTGTTGTTGAAAACTCGGAGCATAGGAATGATACCATTAGAG 29121 Query 48426 ATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTAT--ATTACTAATTGAAATAC 48483 |||||||||||| | || || || | || | || | | |||| | || Sbjct 29120 GAACCATTGGTTCCAGCGATGTAGGAACCCGTGGCACGGATTCTGTGCACATTG--AGAC 29063 Query 48484 CTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTT 48543 | || ||||| || | || || || | ||||| || ||||| ||||| || || | Sbjct 29062 CGATGCCACCGGCACTCTTGGAGATCATGGCACAAGTCTTCAGGGTGTCATAGATACCCT 29003 Query 48544 CTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTC 48603 | || || || || |||| | | | || ||| | || |||||||| ||| | Sbjct 29002 CAATGCTGTCCTCCTTCATGTCAACCAAGAAGCAAGAGGCCAGCTGCGGATGGGGAGTAC 28943 Query 48604 CTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATG 48663 | | || || || || ||||| ||||| | || |||||| || | ||| | ||| | Sbjct 28942 CAGCGTTGAACAAGGTGGGAGAGGCATGTGTGAAGTATTTCTGAGACATCAAGTGATAGG 28883 Query 48664 TTTCAAT 48670 | || || Sbjct 28882 TCTCGAT 28876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562101836877240