Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20leycettanus_20[genbank_20GCA_5F000787455.1_202014-11- 26] 991 sequences; 25,946,254 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq260 100 2e-15 >seq260 Length=52326 Score = 100 bits (110), Expect = 2e-15 Identities = 155/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 || ||||| || ||||| ||||| || |||||| || || || || | | || Sbjct 28102 CGGAGACGAAGAACAAGGTGAAGGGTCGATTCTTTTTGAATGTTGTAGTCGGACAAGGTA 28161 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 | |||||| | ||||| ||||| ||||||||||| || || || ||||| ||||| Sbjct 28162 CGACCATCTTCCAACTGCTTGCCAGCGAAAATAAGACGCTGCTGGTCGGGAGGGATTCCC 28221 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAG 480730 ||||||||||| ||||| || ||| || |||||||| | | | || || || Sbjct 28222 TCCTTGTCTTGGATCTTGGACTTCACATTGTCGATAGTATCGGAAGACTCAA-CCTCGAG 28280 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || || || |||||||| |||||||| || || || Sbjct 28281 GGTGATTGTCTTGCCGGTGAGGGTCTTAACAAAGATCTG 28319 Score = 98.7 bits (108), Expect = 6e-15 Identities = 115/153 (75%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 |||||||| ||||| ||||| || || ||||| || ||||| |||||||| ||||||||| Sbjct 27940 TCTTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGAGGAATGCCTTCCTTG 27999 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAAGGGTAAT 480736 ||||||||||| || || || || || || | | | | || | ||| |||||| Sbjct 28000 TCTTGAATCTTGCTCTTCACGTTATCGATGGTGTCTGAGCTCTCAACCTCCAA-GGTAAT 28058 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || ||||| | ||||| ||||| || || Sbjct 28059 AGTCTTGCCGGTCAACGTCTTGACGAAGATCTG 28091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268136691201668