Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20leycettanus_20[genbank_20GCA_5F000787455.1_202014-11- 26] 991 sequences; 25,946,254 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq547 113 1e-19 seq669 95.1 4e-14 seq331 91.5 4e-13 >seq547 Length=32544 Score = 113 bits (124), Expect = 1e-19 Identities = 173/242 (71%), Gaps = 6/242 (2%) Strand=Plus/Minus Query 155910 ACACGCTCCATAAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGA- 155968 || |||| ||| || | ||| | ||| | ||| ||||| | ||| | || | ||| Sbjct 29342 ACTCGCTTCATGAAAAGATCGGGAGTCCAGAGAGCGTAGAACAAGTCACGAGC-TCTGAT 29284 Query 155969 CTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGG 156028 ||| || | |||||||||||| || || || ||||| || |||||| | ||| || Sbjct 29283 CTCTTCCTTGCCGTGATTCTTACGGAGATCCAAGAACTCGAAAATATCGGCATGCCAAGG 29224 Query 156029 CTCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGC 156085 ||| || || ||||||||| ||| | |||| ||||| || || ||||| | || Sbjct 29223 CTCAAGGTAGATAGCAAAAGCACCCGGACGCTTGTTTCCACCTTGGTCGACATATCTCGC 29164 Query 156086 AGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCC-GC 156144 ||| || ||||| || | ||||||||||| |||||||| || | ||||||||||| || Sbjct 29163 AGTGTTGTTGAAAACTCGGAGCATAGGAATGATACCATTAGAGGAACCATTGGTTCCAGC 29104 Query 156145 GA 156146 || Sbjct 29103 GA 29102 Score = 98.7 bits (108), Expect = 3e-15 Identities = 125/172 (73%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCAC 155646 ||||||| || || ||||| || || ||| | | | |||||||| | |||||| Sbjct 29723 CAATAGAAGCAAGGTTACACACGGCGACCTCATCCGGGGCACTGTATTCGATGATCTCAG 29664 Query 155647 AGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAG 155706 ||||||||| || || |||||| || | |||||||||||| || ||||||| | Sbjct 29663 TGCACAGGTTGGAGCTGCGGATGGTTCCGAGATTCTTCTGGTTGCTCTTTTTGTTACAGG 29604 Query 155707 CATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAAT 155758 |||||||||| || ||| | ||| |||| ||||| |||| || || || || Sbjct 29603 CATCCTTGTACAGCATGAAGGGGTTTCCGGTCTCGGTCTGGGCTTCGAGGAT 29552 >seq669 Length=48778 Score = 95.1 bits (104), Expect = 4e-14 Identities = 118/159 (74%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466 || || ||||| | || ||| | |||||||| | | | ||||| ||||| | || || Sbjct 3399 ATCAGTCCACAGTCATCACAGATATGGACGCGGAAGGGGTCAGAAACGTCAAACAGACGT 3458 Query 251467 CCCTTGGTGAAGCGAGATG-CACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAA 251525 |||| ||| | | || | ||||| | |||||||||||| |||||||| || ||||| Sbjct 3459 TCCTTCAAAAAG-GCGCTGGCTCCGTGGGCAATCATACAATCGCGCTCCATCTCTCCGAA 3517 Query 251526 ACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTG 251564 ||| |||||||| |||||||| | ||| || | ||||| Sbjct 3518 ACGCAGACCACCGTCGCGAGCACGACCTTCCACTGGCTG 3556 Score = 84.2 bits (92), Expect = 6e-11 Identities = 110/150 (73%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 || ||||| |||||||| |||||| || || || |||||||| | ||| || || Sbjct 3831 TGAGCGATGGTCATACGCGAGGGAATGGCGTGAGGGTTGATGATCAAGTCCGGGACCACA 3890 Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTTTTG 251957 || || ||||| ||||| |||| || | ||| || | ||||| || ||||| || Sbjct 3891 CCCTCGCGTGTGAATGGCATGTCCTCTTGG-CGATACGTGATACCAATGGTACCCTTCTG 3949 Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987 ||||||||| ||| |||||| |||||||| Sbjct 3950 TCCGTGACGCGAAGCGAACTTGTCACCAAT 3979 >seq331 Length=103638 Score = 91.5 bits (100), Expect = 4e-13 Identities = 107/144 (74%), Gaps = 3/144 (2%) Strand=Plus/Minus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | | ||| |||||||| | || ||||| ||| |||| ||||| ||| Sbjct 6235 AGAATTTCCTTGAGACGAGGAACACCGAGAGTAACGTT---CTTTGACGAGACACCGGCA 6179 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 ||||||||||| |||| ||| | ||||| | |||||||||||| || || || | Sbjct 6178 AAGTGGAAAGTGTTCAAAGTCATCTGAGTGGCTGGCTCACCAATGGACTGAGCAGCCAAG 6119 Query 301933 ATACCAACCATTTCTCCTGGTGCT 301956 | ||||||||||| || || ||| Sbjct 6118 ACGCCAACCATTTCGCCAGGAGCT 6095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471798912055967