Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20leycettanus_20[genbank_20GCA_5F000787455.1_202014-11-
26] 991 sequences; 25,946,254 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq171 125 9e-23
seq640 114 2e-19
seq323 107 2e-17
seq547 93.3 5e-13
>seq171
Length=28483
Score = 125 bits (138), Expect = 9e-23
Identities = 173/242 (71%), Gaps = 0/242 (0%)
Strand=Plus/Minus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| || || || ||| |||||| |||||||||||||| | || || ||
Sbjct 2361 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGAGAAATA 2302
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810
||||||| | ||| ||||| | ||| ||| ||| | | ||||| | |
Sbjct 2301 GACTCCATGAAGTCGAAGGGGTTTGTGACGTTGAAGTACTTCTTGTTGCCGAGAGCAACC 2242
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870
|| || |||||||| || ||||||||||||||||||||||| |||||||||||| | |
Sbjct 2241 AGAAGACGGTCGGCTACGAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCAAGG 2182
Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930
|| || || || || | || | | ||||||| ||| || | || ||||| ||||||
Sbjct 2181 AGTGCAACGGGAAGAGCATCAGTAAGGAACTCTTGCTCAATGGCAACAGCCTCAACGATG 2122
Query 868931 AT 868932
||
Sbjct 2121 AT 2120
Score = 102 bits (112), Expect = 1e-15
Identities = 144/196 (73%), Gaps = 11/196 (6%)
Strand=Plus/Minus
Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238
||| ||||| ||| ||| | |||||| || | ||| ||||||||||| ||||||||
Sbjct 2047 ACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCGGGCATGAGACCGCGCTT 1988
Query 869239 CTTGAGCCAAAAGATGG-CGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAA 869297
||| ||||| || |||| ||| || ||| ||||| ||||| |||||||| || || |
Sbjct 1987 CTTCAGCCAGAAAATGGAAGCA-AAGGAGCCGGAGAAGAAGATACCCTCGACCGCCGCGA 1929
Query 869298 AGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTG--TTG-ATCCACTTCATCG 869354
|| | | ||| |||| | ||||||| || ||||||| ||| ||||| || |
Sbjct 1928 AGGCAACGAGACGCTGGCCAAAGGT----AG--ACTCCTTGTCTTGAATCCAACGGATGG 1875
Query 869355 CCCAGTCGGCCTTTTT 869370
|||| |||||||| ||
Sbjct 1874 CCCACTCGGCCTTCTT 1859
>seq640
Length=15387
Score = 114 bits (126), Expect = 2e-19
Identities = 92/111 (83%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
|| |||||||| || ||||||||| |||| || ||| | || |||||| |||| ||||||
Sbjct 7330 GCTGCCAACTATCTTGACATCAAGGCTCTTCTTGATGTCGGCTGCAAGACTGTTGCCAAC 7271
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296
||||| ||||||||||| || |||||||| || ||||| || |||||| ||
Sbjct 7270 ATGATTAAGGGCAAGTCCCCAGAGGAGATTCGGAAGACTTTCAACATCCAG 7220
>seq323
Length=56261
Score = 107 bits (118), Expect = 2e-17
Identities = 120/159 (75%), Gaps = 1/159 (1%)
Strand=Plus/Minus
Query 19045 AGGACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCG 19104
||||||||||||| || |||||||| |||||| | || || |||| || || ||||
Sbjct 11803 AGGACAGCATCGGAGGAACGGTGACCTGCGTGATCAGAAATGTTCCGGTTGGACTGGGCG 11744
Query 19105 AGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCA 19164
|||| ||||| |||||| | || ||| ||| ||||| |||||||| || || || |
Sbjct 11743 AGCCTTGCTTCGACAAGCTGGAAGCCAAGCTGGCCCATGCCATGCTCAGCATTCCAGCAA 11684
Query 19165 CCAAGGGATTCGAGATTGGCAGCGGGTT-TGCGGGTGCG 19202
||||||| |||||||| || ||||| |||| ||||
Sbjct 11683 CCAAGGGCTTCGAGATCGGGTCGGGGTTCGGCGGCTGCG 11645
>seq547
Length=32544
Score = 93.3 bits (102), Expect = 5e-13
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 1628389 AGGCCGGGCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGC 1628448
|| ||||| || || |||||| || |||| |||||||||| | | | | || |
Sbjct 29393 AGACCGGGGGCTTCATTCGGACAGAAAAGCGTCCAGTCGCCATTTGCCTCAACTCGCTTC 29334
Query 1628449 ATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTG 1628508
|| || || || ||||| || ||||| || | ||| || || | | |||| ||||||
Sbjct 29333 ATGAAAAGATCGGGAGTCCAGAGAGCGTAGAACAAGTCACGAGCTCTGATCTCTTCCTTG 29274
Query 1628509 CCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAG 1628568
||||| ||||| ||| || | | |||| ||| ||||| ||||| ||||| ||||||
Sbjct 29273 CCGTGATTCTTACGGAGATCCAAGAACTCGAAAATATCGGCATGCCAAGGCTCAAGGTAG 29214
Query 1628569 CAGGCAAAGGCGCCCTTGCGCTTG 1628592
||||| || ||| ||||||
Sbjct 29213 ATAGCAAAAGCACCCGGACGCTTG 29190
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107057873899147
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |