Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20leycettanus_20[genbank_20GCA_5F000787455.1_202014-11- 26] 991 sequences; 25,946,254 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq171 125 9e-23 seq640 114 2e-19 seq323 107 2e-17 seq547 93.3 5e-13 >seq171 Length=28483 Score = 125 bits (138), Expect = 9e-23 Identities = 173/242 (71%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| |||||||||||||| | || || || Sbjct 2361 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGAGAAATA 2302 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 ||||||| | ||| ||||| | ||| ||| ||| | | ||||| | | Sbjct 2301 GACTCCATGAAGTCGAAGGGGTTTGTGACGTTGAAGTACTTCTTGTTGCCGAGAGCAACC 2242 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 || || |||||||| || ||||||||||||||||||||||| |||||||||||| | | Sbjct 2241 AGAAGACGGTCGGCTACGAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCAAGG 2182 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || || || || | || | | ||||||| ||| || | || ||||| |||||| Sbjct 2181 AGTGCAACGGGAAGAGCATCAGTAAGGAACTCTTGCTCAATGGCAACAGCCTCAACGATG 2122 Query 868931 AT 868932 || Sbjct 2121 AT 2120 Score = 102 bits (112), Expect = 1e-15 Identities = 144/196 (73%), Gaps = 11/196 (6%) Strand=Plus/Minus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| ||| ||| | |||||| || | ||| ||||||||||| |||||||| Sbjct 2047 ACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCGGGCATGAGACCGCGCTT 1988 Query 869239 CTTGAGCCAAAAGATGG-CGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAA 869297 ||| ||||| || |||| ||| || ||| ||||| ||||| |||||||| || || | Sbjct 1987 CTTCAGCCAGAAAATGGAAGCA-AAGGAGCCGGAGAAGAAGATACCCTCGACCGCCGCGA 1929 Query 869298 AGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTG--TTG-ATCCACTTCATCG 869354 || | | ||| |||| | ||||||| || ||||||| ||| ||||| || | Sbjct 1928 AGGCAACGAGACGCTGGCCAAAGGT----AG--ACTCCTTGTCTTGAATCCAACGGATGG 1875 Query 869355 CCCAGTCGGCCTTTTT 869370 |||| |||||||| || Sbjct 1874 CCCACTCGGCCTTCTT 1859 >seq640 Length=15387 Score = 114 bits (126), Expect = 2e-19 Identities = 92/111 (83%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || |||||||| || ||||||||| |||| || ||| | || |||||| |||| |||||| Sbjct 7330 GCTGCCAACTATCTTGACATCAAGGCTCTTCTTGATGTCGGCTGCAAGACTGTTGCCAAC 7271 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296 ||||| ||||||||||| || |||||||| || ||||| || |||||| || Sbjct 7270 ATGATTAAGGGCAAGTCCCCAGAGGAGATTCGGAAGACTTTCAACATCCAG 7220 >seq323 Length=56261 Score = 107 bits (118), Expect = 2e-17 Identities = 120/159 (75%), Gaps = 1/159 (1%) Strand=Plus/Minus Query 19045 AGGACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCG 19104 ||||||||||||| || |||||||| |||||| | || || |||| || || |||| Sbjct 11803 AGGACAGCATCGGAGGAACGGTGACCTGCGTGATCAGAAATGTTCCGGTTGGACTGGGCG 11744 Query 19105 AGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCA 19164 |||| ||||| |||||| | || ||| ||| ||||| |||||||| || || || | Sbjct 11743 AGCCTTGCTTCGACAAGCTGGAAGCCAAGCTGGCCCATGCCATGCTCAGCATTCCAGCAA 11684 Query 19165 CCAAGGGATTCGAGATTGGCAGCGGGTT-TGCGGGTGCG 19202 ||||||| |||||||| || ||||| |||| |||| Sbjct 11683 CCAAGGGCTTCGAGATCGGGTCGGGGTTCGGCGGCTGCG 11645 >seq547 Length=32544 Score = 93.3 bits (102), Expect = 5e-13 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 1628389 AGGCCGGGCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGC 1628448 || ||||| || || |||||| || |||| |||||||||| | | | | || | Sbjct 29393 AGACCGGGGGCTTCATTCGGACAGAAAAGCGTCCAGTCGCCATTTGCCTCAACTCGCTTC 29334 Query 1628449 ATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTG 1628508 || || || || ||||| || ||||| || | ||| || || | | |||| |||||| Sbjct 29333 ATGAAAAGATCGGGAGTCCAGAGAGCGTAGAACAAGTCACGAGCTCTGATCTCTTCCTTG 29274 Query 1628509 CCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAG 1628568 ||||| ||||| ||| || | | |||| ||| ||||| ||||| ||||| |||||| Sbjct 29273 CCGTGATTCTTACGGAGATCCAAGAACTCGAAAATATCGGCATGCCAAGGCTCAAGGTAG 29214 Query 1628569 CAGGCAAAGGCGCCCTTGCGCTTG 1628592 ||||| || ||| |||||| Sbjct 29213 ATAGCAAAAGCACCCGGACGCTTG 29190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107057873899147