Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20leycettanus_20[genbank_20GCA_5F000787455.1_202014-11- 26] 991 sequences; 25,946,254 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq260 122 8e-23 seq381 87.8 2e-12 >seq260 Length=52326 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| |||| || || ||||| || || || || ||||| || || | || Sbjct 28322 ATGCAGATCTTTGTTAAGACCCTCACCGGCAAGACAATCACCCTCGAGGTTGAGTCTTCC 28263 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||||||||| || ||||| |||||||| || Sbjct 28262 GATACTATCGACAATGTGAAGTCCAAGATCCAAGACAAGGAGGGAATCCCTCCCGACCAG 28203 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | || || || || || ||| |||| ||| | | | |||| || || ||| Sbjct 28202 CAGCGTCTTATTTTCGCTGGCAAGCAGTTGGAAGATGGTCGTACCTTGTCCGACTACAAC 28143 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||| |||||||| || ||| | || | || | ||||| || Sbjct 28142 ATTCAAAAAGAATCGACCCTTCACCTTGTTCTTCGTCTCCGCGGTGG 28096 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || || || ||||| || || | || Sbjct 28550 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACGATCACTCTCGAGGTGGAGTCTTCC 28491 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||| ||||| || || || || || || || Sbjct 28490 GATACTATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 28431 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||| || || || |||||||||||| | | |||| || || ||| Sbjct 28430 CAGCGCCTGATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGCACTCTGTCGGACTACAAC 28371 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||||| |||||||| || || ||| |||| |||| | || || ||| Sbjct 28370 ATTCAGAAGGAATCTACGCTTCACCTGGTCCTGCGTCTCCGTGGTGGC 28323 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787 ||||| || || || || ||||| || ||| | | |||||| | || | || || Sbjct 28754 ACCGGCAAGACCATCACCCTCGAGGTGGAATCTAGCGACACCATCGATAACGTCAAGTCG 28695 Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 |||||||| ||||| || || || ||||| || || || ||||||||||| || || || Sbjct 28694 AAGATCCAGGACAAGGAGGGCATTCCTCCAGACCAGCAGCGTTTGATCTTCGCTGGCAAG 28635 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 ||||| ||||| | | | | || || || || ||||| ||||| || || || ||| Sbjct 28634 CAGCTTGAGGACGGCCGTACCCTCTCTGACTACAATATTCAGAAGGAGTCTACCCTTCAC 28575 Query 24908 TTGGTGTTGCGATTGCGCGGAGGC 24931 | || | || | ||||| ||| Sbjct 28574 CTTGTCCTTCGCCTTCGCGGTGGC 28551 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||| | ||||| || |||||||| | || || || | | Sbjct 28094 ATGCAGATCTTCGTCAAGACGTTGACCGGCAAGACTATTACCTTGGAGGTTGAGAGCTCA 28035 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| |||||||| ||||| || ||||| ||||| Sbjct 28034 GACACCATCGATAACGTGAAGAGCAAGATTCAAGACAAGGAAGGCATTCCTCCGGATCAG 27975 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA 24858 || ||| | ||||| || || || ||||| || || Sbjct 27974 CAGCGTCTCATCTTCGCTGGTAAGCAGCTTGAAGA 27940 >seq381 Length=79381 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778 || || || || ||||| || ||||| ||||| || || | | |||||| | || | Sbjct 61799 AAGACCCTGACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGCGACACCATCGACAAC 61740 Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838 || || |||||||| ||||| || || || || || || || || ||||||||||| Sbjct 61739 GTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAGCAGCGTTTGATCTTC 61680 Query 24839 GCCGGGAAACAGCTGGAGGAT 24859 ||||| |||||||| |||||| Sbjct 61679 GCCGGAAAACAGCTCGAGGAT 61659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449892026893480