Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20leycettanus_20[genbank_20GCA_5F000787455.1_202014-11- 26] 991 sequences; 25,946,254 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq171 134 2e-25 seq547 96.9 5e-14 >seq171 Length=28483 Score = 134 bits (148), Expect = 2e-25 Identities = 216/304 (71%), Gaps = 15/304 (5%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || ||||| || || || || ||||||||||| || | |||| Sbjct 1454 GATCTGGCAAATGTAC-AAGAAGGCTGAAGCTTCTTTCTGGACCGCCGAAGAAATTGACC 1512 Query 1455835 TCGGCGCCGACACGGTCC-----ACTGGGTG--TCG-CTGAGCGACGACGAGCGCCATTT 1455886 | | ||| | | || ||||| ||| |||| || ||||||||| | || Sbjct 1513 T----GTCGAAA-GATCTTCACGACTGGAATAATCGGCTGAATGATGACGAGCGCTACTT 1567 Query 1455887 CATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGG 1455946 |||| |||||||| ||||| || |||||| ||| |||||||| |||||||||| Sbjct 1568 CATCTCCCACGTCCTTGCCTTCTT-CGCCGCTTCCGACGGCATCGTCAATGAGAACCTGG 1626 Query 1455947 CCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGA 1456006 | ||||||| ||| | || | || || || |||| || || || ||||||| Sbjct 1627 TGGAGCGCTTTAGCGGAGAAATTCAGATCCCTGAAGCTCGTTGCTTCTATGGCTTCCAGA 1686 Query 1456007 TCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGG 1456066 || || || |||||||||||||| || ||||| || || |||||||| || |||||| Sbjct 1687 TCATGATGGAGAACATCCACTCTGAGACTTACTCTCTGCTCATCGACACATATATCAAGG 1746 Query 1456067 ACCC 1456070 | || Sbjct 1747 AGCC 1750 Score = 113 bits (124), Expect = 6e-19 Identities = 186/261 (71%), Gaps = 8/261 (3%) Strand=Plus/Plus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 |||||||| ||||| || | || ||| ||||||| | | || | || || || || Sbjct 2120 ATCATCGTTGAGGCTGTTGCCATTGAGCAAGAGTTCCTTACTGATGCTCTTCCCGTTGCA 2179 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 ||| | ||||||||||||| |||||||||||||||||| | | || || |||||||| | Sbjct 2180 CTCCTTGGCATGAACGCCA-AGCTCATGTGCCAGTACATCG-AGTTCGTAGCCGACCGTC 2237 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACG--GCCAACCCGTTCCCATGGA 1456700 | || | || |||||| | ||||| ||| | ||| | ||||| ||| | | Sbjct 2238 TTCTGGTTGCTCTCGGCAAC-AAGAAGTACTTC--AACGTCACAAACCCCTTCGACTTCA 2294 Query 1456701 TGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACG 1456759 |||||| || || || | |||||||||||||| |||||| || || || || ||| Sbjct 2295 TGGAGTCTATTTCTCTGGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACC 2354 Query 1456760 CCAAGGCCGGCGTCACCGCCA 1456780 ||||| || |||| |||| Sbjct 2355 AGAAGGCTGGTGTCATGGCCA 2375 Score = 96.9 bits (106), Expect = 5e-14 Identities = 121/158 (77%), Gaps = 11/158 (7%) Strand=Plus/Plus Query 1456123 AAAAAGGCCGACTGGGCGATGAAGTGGAT-CAA--CAAGGAGGGCCTCGACACTTTGCCG 1456179 || |||||||| ||||| || ||||| ||| ||||||| || || ||||| | Sbjct 1859 AAGAAGGCCGAGTGGGCCATCCGTTGGATTCAAGACAAGGAG----TCTAC-CTTTGGCC 1913 Query 1456180 AGCGGCTCGTCGGCTTTGCCGCG-TCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCG-CC 1456237 |||| ||||| | ||| || ||| ||||||| ||||| ||||| ||| || ||| || Sbjct 1914 AGCGTCTCGTTGCCTTCGCGGCGGTCGAGGGTATCTTCTTCTCCGGCTCCTT-TGCTTCC 1972 Query 1456238 ATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 || || ||||| ||||||||||| |||||||||||||| Sbjct 1973 ATTTTCTGGCTGAAGAAGCGCGGTCTCATGCCCGGTCT 2010 >seq547 Length=32544 Score = 96.9 bits (106), Expect = 5e-14 Identities = 179/260 (69%), Gaps = 6/260 (2%) Strand=Plus/Plus Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984 ||||| | || || || || || || | |||||| | || ||||| || | ||| Sbjct 28924 CCCACCTTGTTCAACGCTGGTACTCCCCATCCGCAGCTGGCCTCTTGCTTCTTGGTTGAC 28983 Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044 ||||||| || || ||||| ||||||||||| || ||| || || | |||||| Sbjct 28984 ATGAAGGAGGACAGCATTGAGGGTATCTATGACACCCTGAAGACTTGTGCCATGATCTCC 29043 Query 260045 AAGGCGGCCGGCGGCATCGGTTT---TGCCGCACACAAGGTGCGCGCCGCGGGCGCCTAC 260101 ||| ||||| ||||||||| | || ||||| || | || ||| |||| ||||| Sbjct 29044 AAGAGTGCCGGTGGCATCGGTCTCAATG-TGCACAGAA--TCCGTGCCACGGGTTCCTAC 29100 Query 260102 GTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGAC 260161 | || || ||||| || || || || | | || ||||| || ||||| ||| || Sbjct 29101 ATCGCTGGAACCAATGGTTCCTCTAATGGTATCATTCCTATGCTCCGAGTTTTCAACAAC 29160 Query 260162 ACGGCGCGCTACGTCGACCA 260181 || ||| | || |||||||| Sbjct 29161 ACTGCGAGATATGTCGACCA 29180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177715616228542