Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20leycettanus_20[genbank_20GCA_5F000787455.1_202014-11- 26] 991 sequences; 25,946,254 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq171 143 3e-29 seq547 136 5e-27 seq163 87.8 2e-12 >seq171 Length=28483 Score = 143 bits (158), Expect = 3e-29 Identities = 172/228 (75%), Gaps = 8/228 (4%) Strand=Plus/Plus Query 94732 ACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAA--AG 94788 ||||| || || |||| ||||| || || ||||| || ||| || | |||| || Sbjct 1841 ACAGTCCCCTGCATTCGCAAGAAGGCCGAGTGGGCCATCCGTTGGATTCAAGACAAGGAG 1900 Query 94789 TCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCT 94848 || | |||||| |||| ||| | || || ||| || ||||||||||||||||| Sbjct 1901 TC---TACCTTTGGCCAGCGTCTCGTTGCCTTCGCGGCGGTCGAGGGTATCTTCTTCTCC 1957 Query 94849 GGTTCCTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTT 94907 || ||||| ||| | |||| ||||| |||||||| ||||||||||| |||||| || Sbjct 1958 GGCTCCTT-TGCTTCCATTTTCTGGCTGAAGAAGCGCGGTCTCATGCCCGGTCTCACTTT 2016 Query 94908 CTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 |||||||||||| ||||||||||||||||| || ||| || ||||| Sbjct 2017 CTCCAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACTGACTTTGC 2064 >seq547 Length=32544 Score = 136 bits (150), Expect = 5e-27 Identities = 233/335 (70%), Gaps = 11/335 (3%) Strand=Plus/Plus Query 104513 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 104572 || || |||||| || ||||||| ||||| ||||| || || || ||| ||| ||| Sbjct 29107 GGAACCAATGGTTCCTCTAATGGTATCATTCCTATGCTCCGAGTTTTCAACAACACTGCG 29166 Query 104573 CGCTATGTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAG 104626 | ||||| | |||| ||| ||||| ||| || | || |||| |||||| Sbjct 29167 AGATATGTCGACCAAGGTGGAAACAAGCGTCC---GGGTGCTTTTGCTATCTACCTTGAG 29223 Query 104627 CCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAG 104686 || ||||| || ||||| | |||||| | || | ||| || || || | || ||| Sbjct 29224 CCTTGGCATGCCGATATTTTCGAGTTCTTGGATCTCCGTAAGAATCACGGCAAGGAAGAG 29283 Query 104687 GCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGT 104745 | | || || || | |||| ||||||||||| ||| ||||| ||||||||| |||| Sbjct 29284 AT-CAGAGCTCGTGACTTGTTCTACGCTCTCTGGACTCCCGATCTTTTCATGAAGCGAGT 29342 Query 104746 TGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGC 104805 ||||| | |||| | ||| | || || ||||| | | || || ||||| | |||| Sbjct 29343 TGAGGCAAATGGCGACTGGACGCTTTTCTGTCCGAATGAAGCCCCCGGTCTTGCTGATGT 29402 Query 104806 CGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGT 104840 | ||||| ||||| || ||||||||| ||||| Sbjct 29403 CTATGGTGATGAGTTCGATGCCCTTTACGAAAAGT 29437 Score = 120 bits (132), Expect = 4e-22 Identities = 680/1073 (63%), Gaps = 36/1073 (3%) Strand=Plus/Plus Query 104888 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGAC 104947 ||| | ||||| ||| | | || |||||||| || | || | |||||| ||||| || Sbjct 29543 TGGTACGCTATCCTCGAAGCCCAGACCGAGACCGGAAACCCCTTCATGCTGTACAAGGAT 29602 Query 104948 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGT 105007 ||||||||| ||||||| || || |||||| | || ||| || ||||| || || Sbjct 29603 GCCTGTAACAAAAAGAGCAACCAGAAGAATCTCGGAACCATCCGCAGCTCCAACCTGTGC 29662 Query 105008 ACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATC 105067 || || ||| | |||| | | | |||||| || ||||||||||| || || || Sbjct 29663 ACTGAGATCATCGAATACAGTGCCCCGGATGAGGTCGCCGTGTGTAACCTTGCTTCTATT 29722 Query 105068 GCTCTCCCCAAGTATGTGGAT----CCAGAGACAAAGACATTTGATTATGAAAAACTCCA 105123 || || || | | || ||| || | | | | || || | || || ||||| Sbjct 29723 GCCCTTCCTACATTCGTTGATGCTGCCCGCGGCGAGTAC----GACTTTGGCAAGCTCCA 29778 Query 105124 CGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCC 105183 ||| ||| | || | | ||||| |||| | || || | || | |||||| Sbjct 29779 CGAGGTTGTGCAAGTTCTTGTTCGCAACCTGAACAAGATCATCGACATCAACTATTACCC 29838 Query 105184 CGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGG 105243 ||| || | || ||| || | || || || |||| | ||||||| | || Sbjct 29839 TGTTCCTGAAGCCAGGAAGAGCAATCTGCGTCATCGCCCTATTGCTGTCGGTGTCAATGG 29898 Query 105244 TCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAA 105302 || ||||||| ||| || || || || | | |||||||| | ||| || ||| | Sbjct 29899 CCTTGCGGATGCTTTCCTTGCTCTG-CGTCTGCCGTTTGATTCTGCCGAGGCCAAGCAGC 29957 Query 105303 TCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTC---AGAGT 105359 |||| | || || |||||||| ||||||| ||| ||||| || ||| ||| Sbjct 29958 TCAACATTCAGATTTTCGAGACCATCTATCACGGCGC-CTTGA--CGGCTTCCGTTGAGC 30014 Query 105360 TGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGC 105419 | || ||| | ||||| || || || | ||| || || || | || ||||| | | Sbjct 30015 TTGCGAAGGAACAAGGTCCCTACGAGACTTATGAAGGCTCCCCTGTCTCCCAAGGCATTC 30074 Query 105420 TTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTACGACTGGGAAGCTCTCAA 105477 | || | || |||||||| | | ||| | || | || |||||||| || || || Sbjct 30075 TCCAGTACGACATGTGGGATAG-AACACCCA-CTGACCTCTGGGACTGGGACGCGCTGAA 30132 Query 105478 GGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGC 105537 || || || | ||| | || |||||| | ||| ||||||| ||||| || || Sbjct 30133 GGCGAAGATTGCACAGCACGGTGTACGCAACAGTTTGCTCGTGGCTCCTATGCCCACTGC 30192 Query 105538 CTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTA 105597 ||| |||||| | || || ||||||||||| || || || | || || || Sbjct 30193 AAGCACTAGCCAAATCCTCGGCTTCAACGAATGCTTTGAGCCATATACTTCCAATATTTA 30252 Query 105598 TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA---CAAGCATCTCGTGGATGA 105654 | | | | ||| || || || || ||||||| || |||| | || Sbjct 30253 TTCGCGCCGTGTCCTTGCTGGCGAATTCCAAGTTGTCAATCCTTGGCTTCTC---AAGGA 30309 Query 105655 CCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGG 105714 |||| || ||||||||||||| | | |||||| | | ||| | | || || Sbjct 30310 CCTCGTCGACCTTGGTCTCTGGTCTGACAACATGAAGAACCGCATCATCGCCGAAGGAGG 30369 Query 105715 TTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGTTGTACCGCACAGTTTG 105774 || | ||||| || | ||||| || || ||| | ||| || ||||| Sbjct 30370 CTCTGTCCAAAACATACCCAACATTCCGGCGGATATCAAGGCCCTCTACAAGACTGTTTG 30429 Query 105775 GGAAAT---CAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGA 105831 |||||| | || | | | || | | ||||| || || |||||| |||||| || Sbjct 30430 GGAAATCTCCCAG-CGCACAA--TCTTGCAGATGGCTGCTGACCGTGGTGCCTTCATCGA 30486 Query 105832 TCAAAGTCAAAG--TATGAATCTCTTCATGGAAAGTCCAACGATGTCCAAGCTCTCTTCT 105889 || |||| || | | || || |||| | || || ||| |||| || || Sbjct 30487 TC--AGTCCCAGTCTCTCAACATCCACATGAAGGAGCCTACCATGGGCAAGATCACTAGC 30544 Query 105890 ATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCTCCG 105942 |||||| | ||||||||| ||||||||| || || ||||| || ||||| Sbjct 30545 ATGCACTTTGCTGGTTGGAAGATGGGTCTCAAGACCGGCATGTACTATCTCCG 30597 >seq163 Length=106697 Score = 87.8 bits (96), Expect = 2e-12 Identities = 216/325 (66%), Gaps = 17/325 (5%) Strand=Plus/Plus Query 9614 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 9673 ||||||||||| || || | | || |||| || || ||||||||||| | Sbjct 27193 AAACCATCCATTTCAGTGAGGATCTGATTAAGCGTGCTCTCACGTTCATCATTTCC---- 27248 Query 9674 ATACCACC--AGCACTGCGTTG-------CTTTCCCACGGCATCAATCTCATCAATGAAG 9724 |||||| ||| |||| | | ||| || | ||| ||||| ||||| |||||| Sbjct 27249 --ACCACCAAAGCTCTGCTTCGCTCTCGACTTGCCAATGGCGTCAATTTCATCGATGAAG 27306 Query 9725 ACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCC 9784 | |||||| ||| || | | ||| | || | || || ||||| || || Sbjct 27307 ATGATGCACGGTGTGTTCTTTCTGGCGTTGGCGAACAAGTCACGAACACGAGAGGGACCG 27366 Query 9785 ACACCAACAAACATCTCCACAAAGTTTGCGGCG-GAACATTGGATGAAGGGGACATTAGA 9843 ||||| || |||||||| || || | || | || ||| | || ||| || || ||| Sbjct 27367 ACACCGACGAACATCTCGACGAACTCTGAGCCGCTGACACT-GAAGAAAGGAACGCCAGA 27425 Query 9844 TTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAG 9903 |||||| || | || || || | |||||||| ||||| || ||||| ||||| Sbjct 27426 TTCACCTGCCGTTGCCTTTGCAAGCAATGTCTTACCTGTACCAGGAGGACCCGAGAGGAT 27485 Query 9904 GGCACCTCGTGGAATCTTGGCGCCA 9928 ||||| ||||| |||||||| ||| Sbjct 27486 TGCACCACGTGGGATCTTGGCACCA 27510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583253574856840