Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20leycettanus_20[genbank_20GCA_5F000787455.1_202014-11- 26] 991 sequences; 25,946,254 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq547 192 6e-44 seq837 102 9e-17 >seq547 Length=32544 Score = 192 bits (212), Expect = 6e-44 Identities = 374/544 (69%), Gaps = 10/544 (2%) Strand=Plus/Plus Query 53243 GAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAAC 53302 ||||| || |||| ||| || || ||||| || || ||| | || ||| |||||||| Sbjct 28879 GAGACCTATCACTTGATGTCTCAGAAATACTTCACACATGCCTCTCCCACCTTGTTCAAC 28938 Query 53303 GCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCG 53362 |||||||| || || ||| || | |||||| |||| | |||||||| ||| Sbjct 28939 GCTGGTACTCCCCATCCGCAGCTGGCCTCTTGCTTCTTGGTTGACATGAAGGAGGACAGC 28998 Query 53363 ATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGT 53422 || || || ||||| || || || ||| |||||| ||||||||| | | ||||| Sbjct 28999 ATTGAGGGTATCTATGACACCCTGAAGACTTGTGCCATGATCTCCAAGAGTGCCGGTGGC 29058 Query 53423 ATCGGTATCCAC-TGCTC-GAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACG 53480 |||||| || | ||| | ||| ||||||| | || | ||| || || || | Sbjct 29059 ATCGGTCTCAATGTGCACAGAA--TCCGTGCCACGGGTTCCTACATCGCTGGAACCAATG 29116 Query 53481 GCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCA 53540 | | | |||| ||| | ||||||||||| || ||||||||||| || | || ||| Sbjct 29117 GTTCCTCTAATGGTATCATTCCTATGCTCCGAGTTTTCAACAACACTGCGAGATATGTCG 29176 Query 53541 ACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCG 53600 |||| ||||| ||||| ||| | || || |||||||| ||||| ||||| |||| Sbjct 29177 ACCAAGGTGGAAACAAGCGTCCGGGTGCTTTTGCTATCTACCTTGAGCCTTGGCATGCCG 29236 Query 53601 ACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGAT--GCGCTGCCG 53658 | ||| | ||||| | || || ||| |||||| || | |||||||| | ||| || Sbjct 29237 ATATTTTCGAGTTCTTGGATCTCCGTAAGAATCACGGCAAGGAAGAGATCAGAGCT--CG 29294 Query 53659 TGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACG 53717 |||| |||| ||| ||||| |||| ||| || || |||||| | || ||| | | Sbjct 29295 TGACTTGTTCTAC-GCTCTCTGGACTCCCGATCTTTTCATGAAGCGAGTTGAGGCAAATG 29353 Query 53718 AGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGG 53777 || ||| || | || ||||| || |||||| || | |||||| ||||| | Sbjct 29354 GCGACTGGACGCTTTTCTGTCCGAATGAAGCCCCCGGTCTTGCTGATGTCTATGGTGATG 29413 Query 53778 AGTT 53781 |||| Sbjct 29414 AGTT 29417 Score = 114 bits (126), Expect = 1e-20 Identities = 111/140 (79%), Gaps = 2/140 (1%) Strand=Plus/Plus Query 55786 TGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCC 55845 |||||| |||||||| | |||||| |||||||||||||| |||||| |||| || | || Sbjct 30463 TGCTGACCGTGGTGCCTTCATCGATCAGTCCCAGTCTCTCAACATCCACATGAAGGAGCC 30522 Query 55846 TTCACTGGCCAAGTTGAGCTCG-ATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGG 55904 | | ||| |||| | | || | ||||||||| || ||||||| ||| |||||||| | Sbjct 30523 TACCATGGGCAAGATCA-CTAGCATGCACTTTGCTGGTTGGAAGATGGGTCTCAAGACCG 30581 Query 55905 GTATGTACTATCTGCGGACC 55924 | ||||||||||| || ||| Sbjct 30582 GCATGTACTATCTCCGTACC 30601 >seq837 Length=55311 Score = 102 bits (112), Expect = 9e-17 Identities = 242/356 (68%), Gaps = 10/356 (3%) Strand=Plus/Minus Query 152761 TGGAACATGTTGAGGACCAAGCCCTTGATGTGCGATCCGTCAAGATCCGCGTCGGTCATG 152820 |||| | ||||| || ||| ||||||||||| ||||| ||||| || |||||| Sbjct 33539 TGGAGGAAGTTGATGAGCAAACCCTTGATGTGACTGCCGTCGTGATCCTGATCAGTCATG 33480 Query 152821 ATCATCAGACGACCGTAGCGCAGGTCACGTAGTGAC-CCGTAGACCTTTCCATGTTGAAG 152879 ||||||||| |||| || | || | | | | ||| | ||| |||| || ||||| Sbjct 33479 ATCATCAGATGACCATATCTCAAG-CCCTTGGTGTCGGTGTATTCCTTCTTGTGCTGAAG 33421 Query 152880 CCCGAGGATCTTTTTGAGGTTGGAAAATTCCTCATTATCGGTCACCTGTTTCACCGTGGC 152939 || |||| || |||| || | ||| | || | | | ||||| | | ||| Sbjct 33420 GCCAAGGAAGTTCTTGATATTCTGGATTTCTTGGTTCTTCGCAATCTGTTCGAAAGAGGC 33361 Query 152940 ATCCCGAACATTGCGCGGCTTTCCCCGGAGTGGAAACACGCCGAACGCGTTGCGGCCTA- 152998 ||| || || || | ||||||| | || || ||||| |||||| | |||| | Sbjct 33360 ATCACGGACGTTTAGGAGCTTTCCTCTCAGCGGGAACACACCGAACAGATCTGGGCCAAC 33301 Query 152999 CAACGCTCAGACCGGCAATAGCAAGGGCTTTCGCCGAGTCACCCTCGGTGATAATAAGCG 153058 || ||||| | || || ||||| || | || ||||| |||||||| || | || | | Sbjct 33300 CACCGCTCTG-CCTGCCATAGCCAGACCCTTAGCCGAATCACCCTCTGTCAGGATCAAGG 33242 Query 153059 TACAGTCGTGAGACCG--ATGAGTACCGGCCCAGTTGGCGT-CGTCAAGCTTGGGG 153111 |||||| || ||||| | ||||||||| |||||| | |||| ||||||||| Sbjct 33241 TACAGTGGT--GACCGTCCTTGGTACCGGCCTTGTTGGCATCCGTC-AGCTTGGGG 33189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547209221361800