Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20leycettanus_20[genbank_20GCA_5F000787455.1_202014-11- 26] 991 sequences; 25,946,254 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq260 176 1e-38 seq381 109 1e-18 seq655 93.3 1e-13 seq547 87.8 4e-12 >seq260 Length=52326 Score = 176 bits (194), Expect = 1e-38 Identities = 166/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || ||||||||||| || || |||||||| ||||| || || | | ||| | |||||| Sbjct 28111 AGAACAAGGTGAAGGGTCGATTCTTTTTGAATGTTGTAGTCGGACAAGGTACGACCATCT 28170 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| ||||||||| ||||| ||||| || || ||||| ||||| | ||| |||||||| Sbjct 28171 TCCAACTGCTTGCCAGCGAAAATAAGACGCTGCTGGTCGGGAGGGATTCCCTCCTTGTCT 28230 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||||| || ||||| || || || ||||||||||| ||||| ||| Sbjct 28231 TGGATCTTGGACTTCACATTGTCGATAGTATCGGAAGACTCAACCTCGAGGGTGATTGTC 28290 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| ||||| | |||||| Sbjct 28291 TTGCCGGTGAGGGTCTTAACAAAGATCTGCAT 28322 Score = 176 bits (194), Expect = 1e-38 Identities = 166/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| |||||||| || || || || || ||||| || |||| || || | ||||| Sbjct 28339 AGGACCAGGTGAAGCGTAGATTCCTTCTGAATGTTGTAGTCCGACAGAGTGCGGCCATCC 28398 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||| || |||||||| ||||| || |||||||| || | || ||||||||| Sbjct 28399 TCCAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 28458 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||||| || ||||| || || || || |||||||||||||||||| Sbjct 28459 TGGATCTTGGACTTCACATTGTCGATAGTATCGGAAGACTCCACCTCGAGAGTGATCGTC 28518 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||||||||| || || | |||||| Sbjct 28519 TTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 28550 Score = 149 bits (164), Expect = 1e-30 Identities = 155/202 (77%), Gaps = 6/202 (3%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | |||||||||||||| || ||||| || || || || || || | ||||| Sbjct 28558 CGAAGGCGAAGGACAAGGTGAAGGGTAGACTCCTTCTGAATATTGTAGTCAGAGAGGGTA 28617 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | || || || ||||||||||| |||||||| | || || ||||| ||||||| || Sbjct 28618 CGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCTGGAGGAATGCCC 28677 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTC---AGAGCTTTCAACCTCG 211070 ||||||||||||||||| || ||||| ||||||||||| ||| ||| |||||| Sbjct 28678 TCCTTGTCCTGGATCTTCGACTTGACGTTATCGATGGTGTCGCTAGA---TTCCACCTCG 28734 Query 211071 AGAGTGATCGTCTTTCCCGTGA 211092 || ||||| ||||| || |||| Sbjct 28735 AGGGTGATGGTCTTGCCGGTGA 28756 Score = 143 bits (158), Expect = 6e-29 Identities = 147/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 210923 CTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAA 210982 ||| || ||||| || || || | ||| || | ||| ||||| |||||||| || ||||| Sbjct 27903 CTCCTTCTGGATATTGTAGTCGGAAAGCGTACGTCCGTCTTCAAGCTGCTTACCAGCGAA 27962 Query 210983 GATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTT 211042 ||| || || || || || ||||||| ||||||||||| || ||||| |||||||| Sbjct 27963 GATGAGACGCTGCTGATCCGGAGGAATGCCTTCCTTGTCTTGAATCTTGCTCTTCACGTT 28022 Query 211043 TTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTAC 211102 ||||||||||| ||||| |||||||| | || || ||||| || || | ||||| || Sbjct 28023 ATCGATGGTGTCTGAGCTCTCAACCTCCAAGGTAATAGTCTTGCCGGTCAACGTCTTGAC 28082 Query 211103 AAACACCTGCAT 211114 || | |||||| Sbjct 28083 GAAGATCTGCAT 28094 >seq381 Length=79381 Score = 109 bits (120), Expect = 1e-18 Identities = 134/182 (74%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || || || | ||||| || ||||| || || |||||||| Sbjct 61627 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGTTTTCCGGCGAAGATC 61686 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 | || || ||||| || |||| || ||||||||||||||||| || ||||| ||| Sbjct 61687 AAACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 61746 Query 211047 ATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACA 211103 |||||||| ||| ||||| ||||| || || ||||| ||||| || ||||| || Sbjct 61747 ATGGTGTC---GCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 61803 Query 211104 AA 211105 || Sbjct 61804 AA 61805 >seq655 Length=54813 Score = 93.3 bits (102), Expect = 1e-13 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || |||||||| || |||||||| || || | ||| || | || || Sbjct 16301 AGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTACGGCCGTCC 16242 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 || ||||||||||| |||||||| || || |||||||| || || | || |||||||| Sbjct 16241 TCGAGCTGCTTGCCAGCGAAGATCAGACGCTGTTGGTCGGGGGGGATACCCTCCTTGTC 16183 >seq547 Length=32544 Score = 87.8 bits (96), Expect = 4e-12 Identities = 117/162 (72%), Gaps = 2/162 (1%) Strand=Plus/Minus Query 178223 TTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATCATCGAGACCGGGA 178282 ||||| |||||| ||| || | ||||| || |||||||||||| | |||||||| Sbjct 29442 TTCTC--ACTTTTCGTAAAGGGCATCGAACTCATCACCATAGACATCAGCAAGACCGGGG 29385 Query 178283 GCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCGTTTCATGAAGAGG 178342 || ||||| || ||||| || |||| | || | | ||| ||||| |||||||| || Sbjct 29384 GCTTCATTCGGACAGAAAAGCGTCCAGTCGCCATTTGCCTCAACTCGCTTCATGAAAAGA 29325 Query 178343 TCAGAGGTCCAGATGGCATAGAAAATCTCTCTGGCTCTCATC 178384 || | ||||||| || ||||| | || | ||||| ||| Sbjct 29324 TCGGGAGTCCAGAGAGCGTAGAACAAGTCACGAGCTCTGATC 29283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159137282029715