Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20leycettanus_20[genbank_20GCA_5F000787455.1_202014-11- 26] 991 sequences; 25,946,254 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq260 176 9e-39 seq381 152 1e-31 seq655 114 3e-20 seq171 95.1 3e-14 >seq260 Length=52326 Score = 176 bits (194), Expect = 9e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || || ||||| || | ||| ||| || || ||||||||||| | Sbjct 28324 CCACCACGGAGACGCAGGACCAGGTGAAGCGTAGATTCCTTCTGAATGTTGTAGTCCGAC 28383 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||||||||| || || || || || ||||||| || || |||||| || Sbjct 28384 AGAGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGG 28443 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| |||||||| | || || | |||||||| || |||| || || Sbjct 28444 ATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATAGTATCGGAAGACTCCACC 28503 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||||||||||||||| || || | |||||| ||||| |||||||| Sbjct 28504 TCGAGAGTGATCGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 28550 Score = 150 bits (166), Expect = 4e-31 Identities = 174/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || ||||| |||| || || ||||| || || ||||| |||||||| | | Sbjct 27868 CCACCACGGAGCCGAAGAACCAAGTGCAAGGTGCTCTCCTTCTGGATATTGTAGTCGGAA 27927 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||| || || || || || || || || || ||||| | ||| || || || ||| Sbjct 27928 AGCGTACGTCCGTCTTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGAGGA 27987 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCT-TCGA 283050 || || ||||||||||| ||| ||||| || ||| ||||||| ||||| | |||| || | Sbjct 27988 ATGCCTTCCTTGTCTTGAATC-TTGCTCTTCACGTTATCGATGGTGTCTG-AGCTCTCAA 28045 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | || | || || ||||| || ||||| ||||| ||||| |||||||| Sbjct 28046 CCTCCAAGGTAATAGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCAT 28094 Score = 140 bits (154), Expect = 7e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930 |||||| || || ||||| || || || | || ||||||||| ||||||||||| | Sbjct 28095 ACCACCGCGGAGACGAAGAACAAGGTGAAGGGTCGATTCTTTTTGAATGTTGTAGTCGGA 28154 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| || || ||||| || | || || || || || || | ||| || ||||| | Sbjct 28155 CAAG-GTACGACCATCTTCCAACTGCTTGCCAGCGAAAATAAGACGCTGCTGGTCGGGAG 28213 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 | || |||||||||||||||||||| | || || | |||||||| || |||| || | Sbjct 28214 GGATTCCCTCCTTGTCTTGGATCTTGGACTTCACATTGTCGATAGTATCGGAAGACTCAA 28273 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | ||||| ||||| ||||| || || | |||||||| || |||||||| Sbjct 28274 CCTCGAGGGTGATTGTCTTGCCGGTGAGGGTCTTAACAAAGATCTGCAT 28322 Score = 136 bits (150), Expect = 8e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| || |||||||| || || || | || || || || || |||||||||| Sbjct 28552 CCACCGCGAAGGCGAAGGACAAGGTGAAGGGTAGACTCCTTCTGAATATTGTAGTCAGAG 28611 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || ||||| ||||| || || || || || ||||||||||| || ||||| ||| Sbjct 28612 AGGGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCTGGAGGA 28671 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| |||||||| | || ||| ||||||| ||||| || ||| || Sbjct 28672 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTATCGATGGTGTCGCTAGATTCCACC 28731 Query 283053 TCGAGAGTGATCGTCTTACCCGT 283075 ||||| ||||| ||||| || || Sbjct 28732 TCGAGGGTGATGGTCTTGCCGGT 28754 >seq381 Length=79381 Score = 152 bits (168), Expect = 1e-31 Identities = 141/179 (79%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| || |||||||||||||| || ||||| ||||| |||||| Sbjct 61627 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGTTTTCCGGCGAAGATC 61686 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 ||||| || ||||| ||||| ||||||||||| |||||||| || || ||| | ||| Sbjct 61687 AAACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 61746 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || ||||| | || || ||||| || || ||||||||||||| ||||| ||||| Sbjct 61747 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 61805 >seq655 Length=54813 Score = 114 bits (126), Expect = 3e-20 Identities = 107/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || || || || | ||| || || |||||||||||||||| Sbjct 16317 ACCACCACGCAGGCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGA 16258 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || ||||| ||||| || || || || || ||||||| ||| |||||||| || Sbjct 16257 AAGAGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGTTGGTCGGGGGG 16198 Query 282992 AATACCCTCCTTGTCT 283007 ||||||||||||||| Sbjct 16197 GATACCCTCCTTGTCT 16182 >seq171 Length=28483 Score = 95.1 bits (104), Expect = 3e-14 Identities = 163/235 (69%), Gaps = 4/235 (2%) Strand=Plus/Plus Query 230178 GTTGCAAATGAAAAGGAGTTCATTTGCGACGCTATTCC--TTGCCGTCTTATCGGCATGA 230235 ||||| | ||| | |||||| || || ||| |||| |||| || | ||||||| Sbjct 2135 GTTGCCATTGAGCAAGAGTTCCTTACTGATGCTCTTCCCGTTGCACTCCTT--GGCATGA 2192 Query 230236 ATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAG 230295 | || | |||||| | || || ||||| |||||||| || ||| || | || || || | Sbjct 2193 ACGCCAAGCTCATGTGCCAGTACATCGAGTTCGTAGCCGACCGTCTTCTGGTTGCTCTCG 2252 Query 230296 GGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCC 230355 | || |||| | ||| || |||||||||| || |||||| ||||| || Sbjct 2253 GCAACAAGAAGTACTTCAACGTCACAAACCCCTTCGACTTCATGGAGTCTATTTCTCTGG 2312 Query 230356 AGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410 || || || ||||||||||| ||||||||| | || || || | | | ||||| Sbjct 2313 CTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAGAAGGCTGGTGT 2367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046725909356114