Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20leycettanus_20[genbank_20GCA_5F000787455.1_202014-11- 26] 991 sequences; 25,946,254 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq260 138 3e-27 seq381 122 2e-22 seq547 93.3 1e-13 >seq260 Length=52326 Score = 138 bits (152), Expect = 3e-27 Identities = 157/208 (75%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || ||||| || || || |||||||||||||| || || || Sbjct 28319 CAGATCTTTGTTAAGACCCTCACCGGCAAGACAATCACCCTCGAGGTTGAGTCTTCCGAT 28260 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || ||||| || ||||| || ||||||||||| |||||||| Sbjct 28259 ACTATCGACAATGTGAAGTCCAAGATCCAAGACAAGGAGGGAATCCCTCCCGACCAGCAG 28200 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || ||||| ||||| || || ||| | |||||||| | || |||| |||| || ||| | Sbjct 28199 CGTCTTATTTTCGCTGGCAAGCAGTTGGAAGATGGTCGTAC-CTTGTCCGACTACAACAT 28141 Query 178103 CCAAAAAGAATCAACACTGCATCTTGTT 178130 ||||||||||| || || || |||||| Sbjct 28140 TCAAAAAGAATCGACCCTTCACCTTGTT 28113 Score = 136 bits (150), Expect = 1e-26 Identities = 143/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || | || || || || || ||| | ||||| || ||||||||| Sbjct 28091 CAGATCTTCGTCAAGACGTTGACCGGCAAGACTATTACCTTGGAGGTTGAGAGCTCAGAC 28032 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || |||||||| ||||| ||||| || |||||||| ||||| Sbjct 28031 ACCATCGATAACGTGAAGAGCAAGATTCAAGACAAGGAAGGCATTCCTCCGGATCAGCAG 27972 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || ||||| ||||| ||| | || ||| |||| || || || Sbjct 27971 CGTCTCATCTTCGCTGGTAAGCAGCTTGAAGACGGACGTACGCTTTCCGACTACAATATC 27912 Query 178104 CAAAAAGA 178111 || || || Sbjct 27911 CAGAAGGA 27904 Score = 132 bits (146), Expect = 1e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || |||||||| || || |||||||| ||||||||||| || || Sbjct 28547 CAGATCTTCGTCAAGACTCTCACCGGCAAGACGATCACTCTCGAGGTGGAGTCTTCCGAT 28488 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || ||||| |||||||| || || ||||| || |||||||| Sbjct 28487 ACTATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAG 28428 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || ||||| || ||||| | ||||| | || || ||| | Sbjct 28427 CGCCTGATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGCACTCTGTCGGACTACAACATT 28368 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || ||||| || || || || || Sbjct 28367 CAGAAGGAATCTACGCTTCACCTGGT 28342 Score = 114 bits (126), Expect = 3e-20 Identities = 140/190 (74%), Gaps = 6/190 (3%) Strand=Plus/Minus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACACCATCGAGAACGTCA 177999 |||| || || || |||||||||||||||||| ||| ||||||||||| ||||||| Sbjct 28756 TCACCGGCAAGACCATCACCCTCGAGGTGGAATCTAGC---GACACCATCGATAACGTCA 28700 Query 178000 AACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCG 178059 | ||||| |||||||| || || || ||||| |||||||| || | |||||||| | Sbjct 28699 AGTCGAAGATCCAGGACAAGGAGGGCATTCCTCCAGACCAGCAGCGTTTGATCTTCGCTG 28640 Query 178060 GAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACAC 178119 | || ||||| || || || | || || | || || || | || || || || || | Sbjct 28639 GCAAGCAGCTTGAGGACGGCCGTACCCTCTCTGACTACAATATTCAGAAGGAGTCTACCC 28580 Query 178120 TGCATCTTGT 178129 | || ||||| Sbjct 28579 TTCACCTTGT 28570 >seq381 Length=79381 Score = 122 bits (134), Expect = 2e-22 Identities = 137/182 (75%), Gaps = 6/182 (3%) Strand=Plus/Minus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACACC 177986 ||||| || || || || || || || || |||||||| || || ||| |||||| Sbjct 61805 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGC---GACACC 61749 Query 177987 ATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGA 178046 ||||| |||||||| ||||| |||||||| || || || || || |||||||| || Sbjct 61748 ATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAGCAGCGT 61689 Query 178047 CTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAA 178106 | ||||||||||||||||||||||| ||||| | ||||| ||| || ||| |||| Sbjct 61688 TTGATCTTCGCCGGAAAACAGCTCGAGGATGGCCGCACTCTGAGCGACTACAACATCCAG 61629 Query 178107 AA 178108 || Sbjct 61628 AA 61627 >seq547 Length=32544 Score = 93.3 bits (102), Expect = 1e-13 Identities = 113/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 214265 ACTTTTCATAAAGAGACTCAAATTCCGAACCGTAGACATCATCAAGACCGGGAGCCTCGT 214324 ||||||| ||||| | || || || ||| ||||||||| |||||||||| || || | Sbjct 29437 ACTTTTCGTAAAGGGCATCGAACTCATCACCATAGACATCAGCAAGACCGGGGGCTTCAT 29378 Query 214325 TGGGGCAGAAAAGACTCCATTGTCCATTATCCCTGACTCTTTTCATGAAAAGGTCGGAAG 214384 | || |||||||| |||| | ||||| || |||| ||||||||||| |||| || Sbjct 29377 TCGGACAGAAAAGCGTCCAGTCGCCATTTGCCTCAACTCGCTTCATGAAAAGATCGGGAG 29318 Query 214385 TCCAGATTGCATAAAAAATCTCTCTGGCTCTCAT 214418 |||||| || || || | || | ||||| || Sbjct 29317 TCCAGAGAGCGTAGAACAAGTCACGAGCTCTGAT 29284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203715915999254