Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20piceae_20[genbank_20GCA_5F001657655.1_202016-06-03] 12 sequences; 26,564,319 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 5e-13 seq2 87.8 2e-12 >seq1 Length=3533399 Score = 89.7 bits (98), Expect = 5e-13 Identities = 161/228 (71%), Gaps = 8/228 (4%) Strand=Plus/Plus Query 50632 GAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGC 50691 || ||||||| |||||| |||| || | ||||| || ||||| || ||| | ||| Sbjct 933474 GATGCCGTCGCCATCGAGCAAGAATTCCTGACGGATGCCCTACCCTGTGCCTTGCTTGGC 933533 Query 50692 ATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTG-TTGTTGCA 50750 |||||||| | | |||||| | |||||||| ||||| || ||| | ||| ||||||| Sbjct 933534 ATGAACGCTAAGCTCATGTGCCAATACATTGAATTTGTCGCTGACCGCTTGCTTGTTGC- 933592 Query 50751 GCTGGG--ACAACCGAAATACTATAATG-CACGTAACCCCTTTCCGTTTATGAATAACAT 50807 || || |||| ||| ||||| || | |||| ||||| ||| || ||| | || || Sbjct 933593 TCTCGGTAACAA--GAAGTACTACAACGCCACG-AACCCTTTTGACTTCATGGAGAATAT 933649 Query 50808 ATCGTTGGAGGGCAAAACAAACTTTTTCGAAAGACGTGTAGGCGAATA 50855 || | | ||||| || || || ||||| | || || || || || Sbjct 933650 CTCCCTTGCTGGCAAGACTAATTTCTTCGAGAAGCGCGTCGGTGACTA 933697 >seq2 Length=2474838 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || || | ||| | || || |||| || || || || || |||||||| ||| Sbjct 386908 CCACCGCGGAGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAA 386967 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | |||| || || || || || |||||| |||||||||| || || || ||||| Sbjct 386968 AGGGTGCGGCCATCCTCTAGCTGCTTGCCAGCAAAGATCAGACGCTGTTGGTCAGGAGGG 387027 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || || || ||||| ||| || || | | || | ||||| | || || ||| Sbjct 387028 ATACCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCAGAGGACTCGACT 387087 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || | ||| | |||||||||||||| || || ||||| || |||||| Sbjct 387088 TCCAGAGTAATCGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCATA 387135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507014323947840