Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20piceae_20[genbank_20GCA_5F001657655.1_202016-06-03] 12 sequences; 26,564,319 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq2 111 1e-19 seq5 100 2e-16 >seq2 Length=2474838 Score = 111 bits (122), Expect = 1e-19 Identities = 151/206 (73%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| ||||||| ||| | ||||| | ||||| || ||||| Sbjct 386906 ATGCAGATTTTCGTCAAGACCCTGACCGGCAAAACGATCACTTTGGAAGTTGAATCGTCC 386847 Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| ||||| || || ||| | || | ||| ||||| || || || || |||||| Sbjct 386846 GACACCATCGA--CAATGTCAAGTCCAAGATTCAG-GACAAGGAGGGTATCCCTCCTGAC 386790 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 |||||||| | ||||| || ||||| ||| | ||||||| ||||| | || ||| Sbjct 386789 CAACAGCGCTTGATTTTCGCTGGCAAGCAACTGGAAGATGGACGCACCCTTTCAGACTAC 386730 Query 25176 AATATTCAAAAAGAATCCACGCTACA 25201 || || || ||||| ||||| || || Sbjct 386729 AACATCCAGAAAGAGTCCACTCTCCA 386704 Score = 109 bits (120), Expect = 5e-19 Identities = 156/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||| ||||||| || | || || | ||||| ||||| ||| Sbjct 387134 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACGATTACTCTGGAAGTCGAGTCCTCT 387075 Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| ||||| || || ||| | || | ||| ||||| || || || || |||||| Sbjct 387074 GACACCATCGA--CAATGTCAAGTCCAAGATTCAG-GACAAGGAGGGTATCCCTCCTGAC 387018 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 |||||||| | || ||||| ||||| || |||| |||| ||||| | ||| ||| Sbjct 387017 CAACAGCGTCTGATCTTTGCTGGCAAGCAGCTAGAGGATGGCCGCACCCTTTCCGACTAC 386958 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || ||||| || || || || || || || || || Sbjct 386957 AACATTCAGAAGGAGTCGACCCTTCACTTGGTCCT 386923 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| |||||||| || | |||||| | || || || || || Sbjct 386678 ATGCAGATCTTTGTCAAGACCTTGACCGGAAAGACTATCACACTAGAGGTTGAATCATCA 386619 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| | ||| |||||| || || || || ||||| || |||||| Sbjct 386618 GACACAATCGACAACGTCAAGTCGAAAATCCAAGATAAGGAGGGTATTCCTCCCGACCAA 386559 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || ||||| ||||| || | || |||| || || || ||| ||||| Sbjct 386558 CAGCGCCTGATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGGACGCTGTCCGACTACAAC 386499 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || ||||| || || || ||||| Sbjct 386498 ATCCAGAAGGAGTCCACCCTCCACTTGGTGCT 386467 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| |||| || || ||||||| | || || ||||| ||| Sbjct 387362 ATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCT 387303 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| | ||| || ||| ||||| ||||| || || ||||||||| Sbjct 387302 GACACCATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAAGGAATCCCTCCTGACCAA 387243 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | |||||||| ||||| || | ||||||| ||||| | ||| ||||| Sbjct 387242 CAGCGTCTGATTTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAAC 387183 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 || || || || || || || || Sbjct 387182 ATCCAGAAGGAGTCGACCCTTCA 387160 >seq5 Length=3884132 Score = 100 bits (110), Expect = 2e-16 Identities = 132/181 (73%), Gaps = 4/181 (2%) Strand=Plus/Minus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 || || ||||| |||| || || ||||||| | || || ||||| |||||||| ||| Sbjct 2696774 TTCGTCAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCTGACACCATC 2696715 Query 25068 GAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGA 25125 || || || ||| || ||| ||||| ||||| || || || ||||||||||| Sbjct 2696714 GA--CAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATCCCTCCGGACCAACAGCGCC 2696657 Query 25126 TTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAA 25185 | || |||||||| || || | || |||| ||||||| | |||| ||||| ||||| | Sbjct 2696656 TGATCTTTGCCGGAAAGCAGCTTGAGGATGGTCGCACTCTTAGCGACTACAACATTCAGA 2696597 Query 25186 A 25186 | Sbjct 2696596 A 2696596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327936625780