Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20piceae_20[genbank_20GCA_5F001657655.1_202016-06-03] 12 sequences; 26,564,319 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq1 138 2e-27 seq6 109 1e-18 >seq1 Length=3533399 Score = 138 bits (152), Expect = 2e-27 Identities = 292/432 (68%), Gaps = 8/432 (2%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 ||||||||||||| |||||| | || ||||| |||||||||||| || ||||| ||| Sbjct 933679 TCGAAGAAATTAGTCTTGCCAGCAAGGGAGATATTCTCCATGAAGTCAAAAGGGTTCGTG 933620 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || ||||| | ||| | || || || || | | |||||| || ||||| || | Sbjct 933619 GCGTTGTAGTACTTCTTGTTACCGAGAGCAACAAGCAAGCGGTCAGCGACAAATTCAATG 933560 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 || || | ||| || | || ||||||||||| || ||| || | || || | | Sbjct 933559 TATTGGCACATGAGCTTAGCGTTCATGCCAAGCAAGGCACAGGGTAGGGCATCCGTCAGG 933500 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCT-GTGCCAGAGA 251798 ||||| | ||| |||| || || || | || || ||||| | | | | | Sbjct 933499 AATTCTTGCTCGATGGCGACGGCATCGATAATGATATTCTCAACCACCTGGGGACTGGGG 933440 Query 251799 CAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTC 251858 | | ||| ||| | ||| |||| || | |||| | | ||| ||||| || || Sbjct 933439 C-GGACGTT---CAGGTGAGAGAACAGCAGGCAGGCAAAGTCTGTGTGGAGACCTTCATC 933384 Query 251859 GCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCA 251918 ||| ||| | ||| ||||| | ||||||||||||| ||||| ||| ||||||| Sbjct 933383 ACGAGAGATAAGCTCATTGGAGAAGGTGAGGCCAGGCATCAGACCACGCTTCTTGAGCCA 933324 Query 251919 GAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAAG 251978 ||| || | | ||| ||||||||||| | | |||||||||| | | |||||||| Sbjct 933323 GAAAATAGAGGCAAACGATCCAGAGAAGAAAATACCCTCGACAGCAGCGAAGGCAACAAG 933264 Query 251979 GCGCTCAGCAAA 251990 |||| ||||| Sbjct 933263 ACGCTGGGCAAA 933252 >seq6 Length=4236361 Score = 109 bits (120), Expect = 1e-18 Identities = 117/152 (77%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 280672 CCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAG 280731 |||| | |||||||| ||||| | ||||||||||||| || ||||| ||||| | Sbjct 1409422 CCAACTTTGGTCTGGATGCCGAGCTGGTTTCTCACTCTCGCATGCGTGGTCTGTCTGGTG 1409481 Query 280732 GCCAGAAGGTCAAACTTGTCATCGGAGCA-GCTCTGTGGCAACACCCTCACGTGATCGTT 280790 ||||| ||||| | || ||| || |||| |||||| | ||||||| |||||||| Sbjct 1409482 GCCAGCGTGTCAAGGTCGTGCTCGCCGCGTGCTC-GTGGCAGCGCCCTCACTTGATCGTT 1409540 Query 280791 CTCGACGAGCCTACCAACTATCTGGACCGCGA 280822 |||||||| ||||||||||| || ||||| || Sbjct 1409541 CTCGACGAACCTACCAACTACCTTGACCGTGA 1409572 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/227 (70%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 280129 TCAGCAGTGTCAACTCGCAGGTTTCTATGAACTCACGGATTGGTGTCATTGGACCCAATG 280188 ||||| | ||| || |||||||| | || || || | |||||||| ||||| | Sbjct 1408834 TCAGCGATATCACCTTCCAGGTTTCCCTTGGTTCGCGTATCGCCGTCATTGGTCCCAACG 1408893 Query 280189 GTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCC-ACTGAGGGG 280247 |||| || ||||||||||| |||| || |||| || || || | || |||| || Sbjct 1408894 GTGCCGGCAAGTCTACCCTTGTCAACGTTTTGACCGGTGA-ACTTATCCCCACTGCCGGT 1408952 Query 280248 TCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCACGCTTTCCACCAC 280307 |||| | || ||||| || || || ||| || || ||||||||| |||| Sbjct 1408953 GAGGTTTACCAACACGAGAACATTCGTATCGCCTACATCAAGCAACACGCTTTCGCCCAC 1409012 Query 280308 ATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCG 280354 || || |||||||| |||| ||||||| | || ||||||||||| Sbjct 1409013 ATTGATAACCACCTTGACAAGACTCCTTCGGAGTATATTCAGTGGCG 1409059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836641970092