Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20piceae_20[genbank_20GCA_5F001657655.1_202016-06-03] 12 sequences; 26,564,319 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq2 183 6e-41 seq5 129 1e-24 seq1 116 7e-21 >seq2 Length=2474838 Score = 183 bits (202), Expect = 6e-41 Identities = 179/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| ||||| | |||| ||| || || ||||| || |||||||| || |||||| Sbjct 387136 CCACCGCGGAGGCGGAGGACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 387195 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | |||||| || || || || || | |||||||| || || Sbjct 387196 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAAATCAGACGCTGTTGGTCAGGAGGG 387255 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||||||||| || ||||| | ||||||| ||||||||||| | || || || Sbjct 387256 ATTCCTTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCAGAGGACTCGACC 387315 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || | ||||||||| || ||||| |||||||| ||||| |||||||| ||| Sbjct 387316 TCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATGATG 387366 Score = 176 bits (194), Expect = 8e-39 Identities = 180/235 (77%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286 |||| || || || || || || | |||||||| || |||||||| || |||||||| | Sbjct 386444 TTTAGTTGCCACCACGGAGTCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGT 386503 Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346 | ||||| || |||| ||||| || | |||||| || || || || || | ||||||| Sbjct 386504 AGTCGGACAGCGTCCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGGT 386563 Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406 |||| ||||| || ||||| ||||| || || | ||||||| ||||| ||||||| || Sbjct 386564 CGGGAGGAATACCCTCCTTATCTTGGATTTTCGACTTGACGTTGTCGATTGTGTCTGATG 386623 Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| || || | ||||| || ||||| || | ||||||||| || |||||||| Sbjct 386624 ATTCAACCTCTAGTGTGATAGTCTTTCCGGTCAAGGTCTTGACAAAGATCTGCAT 386678 Score = 176 bits (194), Expect = 8e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||| ||| || ||||||||||| |||||||| || || || Sbjct 386680 CCACCACGGAGACGGAGAACCAGGTGGAGAGTGGACTCTTTCTGGATGTTGTAGTCTGAA 386739 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | ||||| || ||||| || | | |||||||| || || Sbjct 386740 AGGGTGCGTCCATCTTCCAGTTGCTTGCCAGCGAAAATCAAGCGCTGTTGGTCAGGAGGG 386799 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| |||||||| | |||||| ||||||||||| | ||||| ||| Sbjct 386800 ATACCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCGGACGATTCAACT 386859 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| ||||| ||||| || || |||||||||||||| |||||||| Sbjct 386860 TCCAAAGTGATCGTTTTGCCGGTCAGGGTCTTGACGAAAATCTGCAT 386906 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| || || | |||||||| || || ||||| || || ||||| || ||||| Sbjct 386908 CCACCGCGGAGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAA 386967 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| |||| |||||| || || || || || | |||||||| || || Sbjct 386968 AGGGTGCGGCCATCCTCTAGCTGCTTGCCAGCAAAGATCAGACGCTGTTGGTCAGGAGGG 387027 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| |||||||| | |||||| ||||||||||| | || || ||| Sbjct 387028 ATACCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCAGAGGACTCGACT 387087 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| || || || || || || || ||||||||||| |||||||| Sbjct 387088 TCCAGAGTAATCGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 387134 >seq5 Length=3884132 Score = 129 bits (142), Expect = 1e-24 Identities = 136/179 (76%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || || ||||| || ||| || || | ||||| || | |||||| ||||| || || Sbjct 2696596 TTCTGAATGTTGTAGTCGCTAAGAGTGCGACCATCCTCAAGCTGCTTTCCGGCAAAGATC 2696655 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | |||||||| || || |||||||||||||| || ||||| | |||||| ||| Sbjct 2696656 AGGCGCTGTTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 2696715 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| | || || || || | ||||||||| || ||||| |||||||||||||| Sbjct 2696716 ATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGAA 2696774 >seq1 Length=3533399 Score = 116 bits (128), Expect = 7e-21 Identities = 316/477 (66%), Gaps = 14/477 (3%) Strand=Plus/Minus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || |||||||| || || || || ||||||||| || | |||||| | Sbjct 933716 CATGACACCAGCCTTCTGATAGTCACCGACGCGCTTCTCGAAGAAATTAGTCTTGCCAGC 933657 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 ||||| || ||||||||||||||| |||||| |||| | | ||| || ||| Sbjct 933656 AAGGGAGATATTCTCCATGAAGTCAAAAGGGTTCGTGGCGTTGTAGTACTTCTTGTTACC 933597 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 ||| || | | ||||||||| || || || ||||| |||| ||| || | | ||| Sbjct 933596 GAGAGCAACAAGCAAGCGGTCAGCGACAAATTCAATGTATTGGCACATGAGCTTAGCGTT 933537 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174 |||||||| || | ||||| | ||| || | ||| || | ||| ||||||| || Sbjct 933536 CATGCCAAGCAAGGCACAGGGTAGGGCATCCGTCAGGAATTCTTGCTCGATGGCGACGGC 933477 Query 10175 TTCCTCGACGATGCTCTTTACCACGTCAAGGGAC-----AGCTTGTTCTCGAGCTTCGAA 10229 || | ||| ||| ||||| | ||||| | |||| || | || Sbjct 933476 ATCGATAATGATATTCTCAACCAC--CTGGGGACTGGGGCGGACGTTC---AGGTGAGAG 933422 Query 10230 TACAGGAGCTCTCCAAACTGCTG-GTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGA 10288 |||| || |||| | ||| |||||| || || || || ||| | ||| ||||| Sbjct 933421 AACAGCAGGCAGGCAAAGT-CTGTGTGGAGACCTTCATCACGAGAGATAAGCTCATTGGA 933363 Query 10289 CAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCC 10348 || || || ||||| || || || || ||||||||||| | | ||||| || Sbjct 933362 GAAGGTGAGGCCAGGCATCAGACCACGCTTCTTGAGCCAGAAAATAGAGGCAAACGATCC 933303 Query 10349 GGAGAACAGAAGACCCTCCAC-GCACACCCAGGCGACGAGGCGCTCTGCGAAGGAGC 10404 ||||| | || |||||| || ||| | |||| || || |||| || |||| || Sbjct 933302 AGAGAAGAAAATACCCTCGACAGCA-GCGAAGGCAACAAGACGCTGGGCAAAGGTGC 933247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921622261756640