Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20piceae_20[genbank_20GCA_5F001657655.1_202016-06-03] 12 sequences; 26,564,319 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq2 140 3e-28 seq10 111 2e-19 seq1 107 2e-18 seq5 93.3 4e-14 >seq2 Length=2474838 Score = 140 bits (154), Expect = 3e-28 Identities = 162/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || |||||||| ||||||||| | || |||||| || | Sbjct 387362 ATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCT 387303 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || || |||| ||||| || ||||| || | ||||| Sbjct 387302 GACACCATCGACAACG-TCAAGTCGAAGATCCAGGACAAGGAAGGAATCCCTCCTGACCA 387244 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| || |||| || ||||| |||||||| || | ||||||||| ||||||||| Sbjct 387243 ACAGCGTCTGATTTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAA 387184 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| ||||| |||| || || |||| || || Sbjct 387183 CATCCAGAAGGAGTCGACCCTTCACCTGGTCCTCCG 387148 Score = 102 bits (112), Expect = 8e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| || || || | || |||||| || | Sbjct 387134 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACGATTACTCTGGAAGTCGAGTCCTCT 387075 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || || || | ||||| ||||| || || | |||||| Sbjct 387074 GACACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCTCCTGACCAA 387015 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | || ||||| ||||| || || | |||||||| |||||||||| Sbjct 387014 CAGCGTCTGATCTTTGCTGGCAAGCAGCTAGAGGATGGCCGCACCCTTTCCGACTACAAC 386955 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 || || ||||| |||| || || ||||| || ||| Sbjct 386954 ATTCAGAAGGAGTCGACCCTTCACTTGGTCCTCCGT 386919 Score = 96.9 bits (106), Expect = 3e-15 Identities = 100/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387 ||||||| || || ||||| ||||| ||||||||||||| || || | || ||||| Sbjct 386594 AAAATCCAAGATAAGGAGGGTATTCCTCCCGACCAACAGCGCCTGATCTTTGCTGGCAAG 386535 Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCAT 38447 |||||||| || | || || || ||||||||||||||| ||||| | || || || Sbjct 386534 CAGCTGGAGGATGGCCGGACGCTGTCCGACTACAACATCCAGAAGGAGTCCACCCTCCAC 386475 Query 38448 TTGGTGCTGCG 38458 |||||||| || Sbjct 386474 TTGGTGCTCCG 386464 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || |||||||| ||||| | || || || | || Sbjct 386906 ATGCAGATTTTCGTCAAGACCCTGACCGGCAAAACGATCACTTTGGAAGTTGAATCGTCC 386847 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || || || | ||||| ||||| || || | |||||| Sbjct 386846 GACACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCTCCTGACCAA 386787 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | |||| ||| ||||| || ||||| || | |||||||| ||||||||| Sbjct 386786 CAGCGCTTGATTTTCGCTGGCAAGCAACTGGAAGATGGACGCACCCTTTCAGACTACAAC 386727 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| || || | || || || |||| || ||| Sbjct 386726 ATCCAGAAAGAGTCCACTCTCCACCTGGTTCTCCGT 386691 >seq10 Length=2854447 Score = 111 bits (122), Expect = 2e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| |||||||||||| | |||||||| || || || | ||| ||||| ||||| || Sbjct 982414 GACAAGGAGGGAATTCCCCCTGACCAACAACGTCTGATCTTCGCCGGCAAGCAGCTCGAA 982473 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 |||| ||||| || || ||||||||||| ||||| |||| ||||| ||||||||| Sbjct 982474 GACGGCCGCACTCTTTCGGATTACAACATCCAGAAGGAGTCGACCCTGCACTTGGTGCTG 982533 Query 38457 CGTTTGAGAGGCGG 38470 ||| || | || || Sbjct 982534 CGTCTGCGTGGTGG 982547 >seq1 Length=3533399 Score = 107 bits (118), Expect = 2e-18 Identities = 189/275 (69%), Gaps = 3/275 (1%) Strand=Plus/Minus Query 133168 TAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAG 133227 |||||||| |||||| || || | ||||| || | ||| ||||| ||| || || Sbjct 933081 TAGGTGTCAATGAGGAGAGAGTAAGTCTCCGAATGGATGTTTTCCATCATGATCTGGAAT 933022 Query 133228 CCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTT 133287 || || ||||| || || ||| ||||||||||| ||| ||||| || || || Sbjct 933021 CCATAGAAGCAGCGGGCTTCGGGAACCTGCACTTCACCGCTGAAGCGCTCAACGAGGTTC 932962 Query 133288 TCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGC 133347 ||||| ||||| ||||| ||||| || ||||| || ||||| ||| || | ||| Sbjct 932961 TCGTTCACGATACCGTCTGACGCGGCAAAGAAGGCAAGGACGTGGGAGATAAAGTACCGC 932902 Query 133348 TCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCG 133404 || | || ||| | || | |||||| || || || || || || | ||| || Sbjct 932901 TCATCGTTGTTGAGACGGTTGTTCCAGTCATGCAGATCTTTCGAGAGATCAATCTCTTCA 932842 Query 133405 ACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 | ||||| || || || ||||| || |||||||| Sbjct 932841 GCAGTCCAGAAGGAAGCTTCGGCCTTCTTGTACAT 932807 >seq5 Length=3884132 Score = 93.3 bits (102), Expect = 4e-14 Identities = 129/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || |||||||| ||||||||| | || |||||| || | |||| | | Sbjct 2696774 TTCGTCAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCTGACACCATC 2696715 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || |||| ||||| || || || || | ||||||||||| || Sbjct 2696714 GACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATCCCTCCGGACCAACAGCGCCTG 2696655 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | || || || ||||| || || | ||||| || | |||||||||||| || ||| Sbjct 2696654 ATCTTTGCCGGAAAGCAGCTTGAGGATGGTCGCACTCTTAGCGACTACAACATTCAGAAG 2696595 Query 38433 G 38433 | Sbjct 2696594 G 2696594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172724974080