Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20piceae_20[genbank_20GCA_5F001657655.1_202016-06-03] 12 sequences; 26,564,319 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq2 89.7 5e-13 seq1 87.8 2e-12 >seq2 Length=2474838 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||||| || | | | ||||| || ||||||||||||||| | ||| || ||| || Sbjct 386926 ACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCATCCTCT 386985 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||| || || | | |||| ||||||||||| || ||||| || || || || || | Sbjct 386986 AGCTGCTTGCCAGCAAAGATCAGACGCTGTTGGTCAGGAGGGATACCCTCCTTGTCCTGA 387045 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || || || | | || | || || | | ||| ||||| | || | ||| || Sbjct 387046 ATCTTGGACTTGACATTGTCGATGGTGTCAGAGGACTCGACTTCCAGAGTAATCGTCTTG 387105 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || |||||||| || | ||| |||||||| Sbjct 387106 CCGGTCAGAGTCTTGACGAAGATCTGCAT 387134 Score = 86.0 bits (94), Expect = 6e-12 Identities = 122/172 (71%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 148237 TACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGC 148296 ||||||||||| | | || |||| || ||||||||||| | || || ||||||| | Sbjct 1306304 TACGTCTCAATCACTTTCTCAATGTTATCTCCGTGAATGCCAACAGCCACACGCATGATC 1306245 Query 148297 ATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGG 148356 |||||||| || || |||||||| | ||||| || |||||| ||| || Sbjct 1306244 ATGTGCTGGGGACGCTCGGCAACCTTGCCATTGATACGAAGTAGATATGAGCGTTCAAGC 1306185 Query 148357 GTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCG 148408 |||||| | |||||||| | ||| | || || | || || ||||||||| Sbjct 1306184 GTTTTGAAGCCAAAGTATTGGTAGTTGAAGTCACGGTCATAGACGATGGCCG 1306133 >seq1 Length=3533399 Score = 87.8 bits (96), Expect = 2e-12 Identities = 132/183 (72%), Gaps = 6/183 (3%) Strand=Plus/Plus Query 47094 GCCTTGCTGGGCATGAACGCACAGTCTATGTGCGAATATATTGAGTTTGTGGCGGATCGT 47153 |||||||| ||||||||||| || |||||| |||| ||||| ||||| || || || Sbjct 933522 GCCTTGCTTGGCATGAACGCTAAGCTCATGTGCCAATACATTGAATTTGTCGCTGACCGC 933581 Query 47154 CTG-TTGGTGCAGCTCGG--ACAACCGAAATATTTTAATGCTCGTAATCCGTTTGAGTTT 47210 || ||| ||| ||||| |||| ||| || | || || || || ||||| || Sbjct 933582 TTGCTTGTTGC-TCTCGGTAACAA--GAAGTACTACAACGCCACGAACCCTTTTGACTTC 933638 Query 47211 ATGAACAACATTTCGCTCGAGGGCAAAACCAATTTTTTCGAGAAACGAGTCGGAGAGTAT 47270 ||| | || || || || | ||||| || ||||| |||||||| || ||||| || ||| Sbjct 933639 ATGGAGAATATCTCCCTTGCTGGCAAGACTAATTTCTTCGAGAAGCGCGTCGGTGACTAT 933698 Query 47271 AAG 47273 || Sbjct 933699 CAG 933701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476611128508320