Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20piceae_20[genbank_20GCA_5F001657655.1_202016-06-03] 12 sequences; 26,564,319 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq2 168 7e-37 seq1 100 3e-16 >seq2 Length=2474838 Score = 168 bits (186), Expect = 7e-37 Identities = 474/715 (66%), Gaps = 12/715 (2%) Strand=Plus/Plus Query 53242 TGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAA 53301 |||||||||| | | ||| ||| |||||||| || || || | || |||||||| || Sbjct 1306296 TGAGACGTACAATCTCATGTCCCAGAAGTACTTCACTCATGCTTCTCCTACCCTGTTTAA 1306355 Query 53302 CGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTC 53361 || || || || || ||| | | ||||||||||| | |||||||| ||| Sbjct 1306356 TGCAGGCACCCCCCAACCCCAGCTTGCATCATGCTTCCTGGTCGACATGAAGGAAGACAG 1306415 Query 53362 GATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGG 53421 ||||| || |||||||| || || ||| ||||| ||||||||| | || || Sbjct 1306416 TATCGATGGGATCTACGATACTCTAAAGACCTGTGCTATGATCTCCAAGACTGCAGGCGG 1306475 Query 53422 TATCGGTATCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAAC 53479 || || | || || | || ||||| | | ||| || || || || ||| Sbjct 1306476 CATTGGATTGAACG--TCCACCGCATCCGTTCTACTGGCTCATACATTGGCGGAACAAAC 1306533 Query 53480 GGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTC 53539 || | | | || |||| || ||||||||||| ||||||||||| ||| |||| ||| Sbjct 1306534 GGAACCTCGAACGGTCTCGTTCCGATGCTCCGCGTGTTCAACAACACTGCCAGGTATGTC 1306593 Query 53540 AACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCC 53599 |||| || || |||||| || | || || |||||||||||||| |||||| | Sbjct 1306594 GACCAAGGAGGAAACAAGCGCCCCGGTGCCTTTGCTATCTACCTCGAGCCATGGCACTCG 1306653 Query 53600 GACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CG 53658 ||| | | || || | || || || ||| || ||| | ||||| | || ||| || Sbjct 1306654 GACGTGTTTGAATTCTTGGATCTCCGCAAGAACCACGGTAAGGAAGAAGTCCG-TGCTCG 1306712 Query 53659 TGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACG 53717 ||| || || ||| || |||||| || ||||| ||||||| |||||| || Sbjct 1306713 TGATCTCTTCTAC-GCCTTGTGGACGCCCGACCTGTTCATGCGCCGTGTGGAGGCCAACC 1306771 Query 53718 AGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGG 53777 | || ||| || | || || || || ||||||||| | ||| || || || | Sbjct 1306772 AAGACTGGACATTGTTCTGTCCTAATGAAGCCCCCGGCCTGGCCGATGTGTATGGCGAAG 1306831 Query 53778 AGTTTAACGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAG-AAGGTCAAG 53836 ||||| | | ||||| | |||| ||||||| | | | | ||| ||| Sbjct 1306832 AGTTTGATGCCCTGTATGAAAAATACGAGAAGGAGGGCCG-TGGGCGCCGCACGGTGAAG 1306890 Query 53837 GCGCGTGAGGTATGGGATGCAATCCTCAAGAGC-CAGGTGGAGACGGGAACGCCGTACAT 53895 || | || | ||| |||| |||||| | ||| ||| ||||| || | || | || Sbjct 1306891 GCCCAGAAGCTCTGGTATGCGATCCTCGA-AGCTCAGACAGAGACCGGCAACCCTTTTAT 1306949 Query 53896 GTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATC 53950 | ||| |||||| | |||| | |||||||||||||||||| | ||| |||| Sbjct 1306950 GCTCTATAAGGATGCTTGCAACAAAAAGAGCAACCAGAAGAACCTTGGCACCATC 1307004 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTG 55787 |||| | | | ||| ||| |||||||||||| | || | | || | ||| | Sbjct 1307765 TCAAAGCGCTCTACAAGACAGTGTGGGAGATTTCGCAACGTAACATCCTTCAGATGGCCG 1307824 Query 55788 CTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTT 55847 ||||||| ||||||| ||||||||||| ||||| || |||||| |||| || | || Sbjct 1307825 CTGATCGGGGTGCGTTTATCGACCAGTCGCAGTCGCTCAACATCCACATGAAGGAGCCAA 1307884 Query 55848 CACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTA 55907 | ||| |||| | | | ||||||||| || ||||||| ||| ||||||||||| | Sbjct 1307885 CCATGGGCAAGATCACCAGTATGCACTTTGCGGGTTGGAAGATGGGTCTCAAGACGGGCA 1307944 Query 55908 TGTACTATCTGCGGACC 55924 ||||||| |||| ||| Sbjct 1307945 TGTACTACTTGCGTACC 1307961 >seq1 Length=3533399 Score = 100 bits (110), Expect = 3e-16 Identities = 278/421 (66%), Gaps = 4/421 (1%) Strand=Plus/Plus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 ||||| |||||||| || |||||||| | || |||||| || || || || || |||| | Sbjct 445527 CCAGTGCCGATACCATCAGCACCATTGACCAAAATCATAGGAACCACGGGCACATAGAGC 445586 Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGGA 117271 || || || | || | || |||||| | ||| | | | | | ||| || Sbjct 445587 TCGGGTTCAATCTTCTCTCCATCGTCCTCGTTATACGTCAAGAGAGGTTCATCAGCTGGG 445646 Query 117272 TCGAATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCA 117331 | ||| | | ||| | || | || | ||| |||||||||||| ||| |||||| Sbjct 445647 TGGAAAACCCGCCTGGCAAAAGGCGACAGTCTGGTGTAAATGTAACGAGCGCTCGCAGCA 445706 Query 117332 TCCTTGCCA-CCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTT 117390 || |||| ||| ||| || |||| || | || || || ||||| ||| | ||| Sbjct 445707 TCAGAGCCACCCATCAA-TCGACTACCAAAGTTACCGCTAGGTTCCAAACAGTTGATGTT 445765 Query 117391 GTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTG-GAGGCTCGCCTCAC 117449 ||| | || || ||||| || || | | | || || ||| | | || | |||| Sbjct 445766 GTTCGAACCAACGAAGTTCTGCGCGAGGCCAATGATGGTTTGTTGTAAAGATC-CTTCAC 445824 Query 117450 CATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTCTG 117509 |||| |||||||| ||| | | ||| | ||||||| || | ||||| |||||| Sbjct 445825 CATGCTGATACGCTGTCATACCAGACACATGACCCGCCAACTCCACAACCTTGATGTCTT 445884 Query 117510 ACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACCAT 117569 | | | ||| |||| |||| || | ||| |||||||| | ||||| ||||||| Sbjct 445885 TCTTGATGTTGCGTTTGAAACAGGTGTAGAGCACTTTGCGCTGGCCAGGCTTGAGACCAT 445944 Query 117570 C 117570 | Sbjct 445945 C 445945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215917917600