Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20piceae_20[genbank_20GCA_5F001657655.1_202016-06-03] 12 sequences; 26,564,319 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq2 104 1e-17 seq10 102 5e-17 >seq2 Length=2474838 Score = 104 bits (114), Expect = 1e-17 Identities = 158/220 (72%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | |||| ||||||||| ||| || || ||||| || |||||||| || || Sbjct 386689 AGACGGAGAACCAGGTGGAGAGTGGACTCTTTCTGGATGTTGTAGTCTGAAAGGGTGCGT 386748 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||| ||||| || || || || || || ||||||||||| || || | |||||| Sbjct 386749 CCATCTTCCAGTTGCTTGCCAGCGAAAATCAAGCGCTGTTGGTCAGGAGGGATACCCTCC 386808 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTCCACTTCCACGG 34666 ||||| ||| || | || || | || ||||| || | || ||||||| | Sbjct 386809 TTGTC-CTGAATCTTGGACTTGACATTGTCGATGGTGTCGGACGAT-TCAACTTCCAAAG 386866 Query 34667 TTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | |||||||| ||||| | || || || ||||||||||| Sbjct 386867 TGATCGTTTTGCCGGTCAGGGTCTTGACGAAAATCTGCAT 386906 Score = 91.5 bits (100), Expect = 9e-14 Identities = 161/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 34476 GTCGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATC 34535 || ||| || | || || | |||||| ||||| ||| |||||| || ||||| || || Sbjct 386448 GTTGCCACCACGGAGTCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 386507 Query 34536 TGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGG 34595 || || || || | || || || || || || ||||| || | ||||||||||| || Sbjct 386508 GGACAGCGTCCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGGTCGGG 386567 Query 34596 CGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCT 34654 || | |||||||| ||| ||| ||| | || ||| | ||||||||| | Sbjct 386568 AGGAATACCCTCCTTATCTTGGAT-TTTCGACTTGACGTTGTCGATTGTGTCTGATGATT 386626 Query 34655 CCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || || | || || || || ||||| || || || ||||| |||||||| Sbjct 386627 CAACCTCTAGTGTGATAGTCTTTCCGGTCAAGGTCTTGACAAAGATCTGCAT 386678 Score = 91.5 bits (100), Expect = 9e-14 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||| || || || |||||| |||||||| || || ||||| || || Sbjct 386917 AGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAAAGGGTGCGG 386976 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || || || || || ||||| || | |||||||||||| || || | |||||| Sbjct 386977 CCATCCTCTAGCTGCTTGCCAGCAAAGATCAGACGCTGTTGGTCAGGAGGGATACCCTCC 387036 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| ||| || | || || | || ||||| | ||| ||||||| || Sbjct 387037 TTGTC-CTGAATCTTGGACTTGACATTGTCGATGGTGTCAGAGGACTCGACTTCCAGAGT 387095 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| || ||||| | || || || || |||||||| Sbjct 387096 AATCGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 387134 Score = 82.4 bits (90), Expect = 5e-11 Identities = 138/197 (70%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574 |||||| || ||||| || || || || || || | ||||| || || || || ||||| Sbjct 387171 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAA 387230 Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA 34634 || | |||||||||||| || || | ||| |||||||| |||| || | || ||| Sbjct 387231 AATCAGACGCTGTTGGTCAGGAGGGATTCCTTCCTTGTCCTGGATC-TTCGACTTGACGT 387289 Query 34635 T-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCA 34693 | || ||||| | ||| || || | ||| || || || || || | || |||| Sbjct 387290 TGTCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCA 387349 Query 34694 CAAAAATCTGCATGTTG 34710 | || ||||||||| || Sbjct 387350 CGAAGATCTGCATGATG 387366 >seq10 Length=2854447 Score = 102 bits (112), Expect = 5e-17 Identities = 98/126 (78%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||| |||||| || || || |||||| || ||||| ||||| ||||| || || Sbjct 982538 AGACGCAGCACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGG 982479 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 ||||||| || || || ||||| || || | ||| |||||||| || || | ||||||| Sbjct 982478 CCGTCTTCGAGCTGCTTGCCGGCGAAGATCAGACGTTGTTGGTCAGGGGGAATTCCCTCC 982419 Query 34609 TTGTCT 34614 |||||| Sbjct 982418 TTGTCT 982413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729553970796