Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20piceae_20[genbank_20GCA_5F001657655.1_202016-06-03] 12 sequences; 26,564,319 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq2 140 3e-28 seq10 95.1 1e-14 >seq2 Length=2474838 Score = 140 bits (154), Expect = 3e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||||||||||||| | |||||||| ||||| || | || Sbjct 387134 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACGATTACTCTGGAAGTCGAGTCCTCT 387075 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || ||||| ||||| || || || || || || ||| Sbjct 387074 GACACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCTCCTGACCAA 387015 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || ||||| || | || || | ||| ||||||| |||||| Sbjct 387014 CAGCGTCTGATCTTTGCTGGCAAGCAGCTAGAGGATGGCCGCACCCTTTCCGACTACAAC 386955 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| |||||||||||| | || ||||| | ||| | || ||||| || Sbjct 386954 ATTCAGAAGGAGTCGACCCTTCACTTGGTCCTCCGTCTCCGCGGTGGTAT 386905 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || ||||||||||| | || ||| | ||||| ||| ||||| Sbjct 386906 ATGCAGATTTTCGTCAAGACCCTGACCGGCAAAACGATCACTTTGGAAGTTGAATCGTCC 386847 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || ||||| ||||| || || || || || || ||| Sbjct 386846 GACACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCTCCTGACCAA 386787 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| || || | ||| ||||| ||| ||||||| | ||| |||| || |||||| Sbjct 386786 CAGCGCTTGATTTTCGCTGGCAAGCAACTGGAAGATGGACGCACCCTTTCAGACTACAAC 386727 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || ||||| || | || ||||| | ||| | || ||||| || Sbjct 386726 ATCCAGAAAGAGTCCACTCTCCACCTGGTTCTCCGTCTCCGTGGTGGTAT 386677 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || ||||| |||||| | || || ||||| || || | || Sbjct 387363 CATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTC 387304 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || || | ||||| || || || ||||| ||||| || || || || || Sbjct 387303 TGACACCATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAAGGAATCCCTCCTGACCA 387244 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||||||| | || | || ||||| || ||||||| | ||| | ||||| ||||| Sbjct 387243 ACAGCGTCTGATTTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAA 387184 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || |||||||||||| | || |||| | || | || ||||| || Sbjct 387183 CATCCAGAAGGAGTCGACCCTTCACCTGGTCCTCCGCCTCCGCGGTGGTAT 387133 >seq10 Length=2854447 Score = 95.1 bits (104), Expect = 1e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 27080 AGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGA 27139 |||||| || || || || || || ||||| ||| | || | ||||||||| || | || Sbjct 982413 AGACAAGGAGGGAATTCCCCCTGACCAACAACGTCTGATCTTCGCCGGCAAGCAGCTCGA 982472 Query 27140 AGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTT 27199 |||| | || |||| ||||||||||| || |||||||||||| | || ||||| | Sbjct 982473 AGACGGCCGCACTCTTTCGGATTACAACATCCAGAAGGAGTCGACCCTGCACTTGGTGCT 982532 Query 27200 GCGTTTGCGGGGTGG 27214 |||| |||| ||||| Sbjct 982533 GCGTCTGCGTGGTGG 982547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918334762240