Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20piceae_20[genbank_20GCA_5F001657655.1_202016-06-03] 12 sequences; 26,564,319 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq2 197 3e-45 seq5 138 3e-27 seq10 116 9e-21 >seq2 Length=2474838 Score = 197 bits (218), Expect = 3e-45 Identities = 171/212 (81%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| |||||||| || ||||| || |||||||| || || | ||||| | |||||| Sbjct 387151 AGGACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 387210 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || || || || || |||||||||||||| | ||||||||||||| Sbjct 387211 TCCAGCTGCTTGCCAGCAAAAATCAGACGCTGTTGGTCAGGAGGGATTCCTTCCTTGTCC 387270 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||||||||||||| || ||||| || ||||| ||| Sbjct 387271 TGGATCTTCGACTTGACGTTGTCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTC 387330 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || ||||| || || | |||||| Sbjct 387331 TTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 387362 Score = 185 bits (204), Expect = 2e-41 Identities = 168/212 (79%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| |||||||||||||| |||||||| || || | |||||| | ||||||| Sbjct 386695 AGAACCAGGTGGAGAGTGGACTCTTTCTGGATGTTGTAGTCTGAAAGGGTGCGTCCATCT 386754 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||| |||||||| ||||| || | ||| |||||||||||||| | || ||||||||| Sbjct 386755 TCCAGTTGCTTGCCAGCGAAAATCAAGCGCTGTTGGTCAGGAGGGATACCCTCCTTGTCC 386814 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || || || ||||||||||| || |||||| || | ||||||||| Sbjct 386815 TGAATCTTGGACTTGACATTGTCGATGGTGTCGGACGATTCAACTTCCAAAGTGATCGTT 386874 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| || || | |||||| Sbjct 386875 TTGCCGGTCAGGGTCTTGACGAAAATCTGCAT 386906 Score = 170 bits (188), Expect = 4e-37 Identities = 171/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||| |||| || || | ||| || |||||||| || |||||||| || || | || || Sbjct 386457 ACGGAGTCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGCGT 386516 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 || ||||| |||||||||||||| || ||||| ||||| |||||||| ||||||| || Sbjct 386517 CCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGGTCGGGAGGAATACC 386576 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||| || ||||| || || ||||| ||||| ||||| || ||||||||| || Sbjct 386577 CTCCTTATCTTGGATTTTCGACTTGACGTTGTCGATTGTGTCTGATGATTCAACCTCTAG 386636 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| |||||||| || | ||||| ||||| | |||||| Sbjct 386637 TGTGATAGTCTTTCCGGTCAAGGTCTTGACAAAGATCTGCAT 386678 Score = 170 bits (188), Expect = 4e-37 Identities = 165/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | |||||| || ||||| || || ||||| || || | |||||| | ||||| Sbjct 386923 AGGACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCATCC 386982 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| || || |||||||||||||| | || ||||||||| Sbjct 386983 TCTAGCTGCTTGCCAGCAAAGATCAGACGCTGTTGGTCAGGAGGGATACCCTCCTTGTCC 387042 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || || || ||||||||||||||| || || || ||||| |||||| Sbjct 387043 TGAATCTTGGACTTGACATTGTCGATGGTGTCAGAGGACTCGACTTCCAGAGTAATCGTC 387102 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || |||||||| || || | |||||| Sbjct 387103 TTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 387134 >seq5 Length=3884132 Score = 138 bits (152), Expect = 3e-27 Identities = 138/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || || ||||| || || ||| || | ||||| || |||||||| || || ||||| Sbjct 2696596 TTCTGAATGTTGTAGTCGCTAAGAGTGCGACCATCCTCAAGCTGCTTTCCGGCAAAGATC 2696655 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 ||||| |||||||| ||||| | |||||||||||||||||||| || || || ||| Sbjct 2696656 AGGCGCTGTTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 2696715 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 |||||||||||| || ||||| || ||||| ||||| ||||| || ||||| || || Sbjct 2696716 ATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGAA 2696774 >seq10 Length=2854447 Score = 116 bits (128), Expect = 9e-21 Identities = 97/119 (82%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || || ||||| || |||||||| ||||||| ||| || | || ||| Sbjct 982532 AGCACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCGTCT 982473 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 || ||||||||||| |||||||| || |||||||||||||| |||| ||| |||||||| Sbjct 982472 TCGAGCTGCTTGCCGGCGAAGATCAGACGTTGTTGGTCAGGGGGAATTCCCTCCTTGTC 982414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151821780380