Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20piceae_20[genbank_20GCA_5F001657655.1_202016-06-03] 12 sequences; 26,564,319 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq2 147 5e-30 seq5 140 8e-28 seq10 96.9 8e-15 >seq2 Length=2474838 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || || || || || || |||||||| ||||| || ||| ||| Sbjct 387359 CAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCTGAC 387300 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| |||||||| |||||||||||||| ||||| || Sbjct 387299 ACCATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAAGGAATCCCTCCTGACCAACAG 387240 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || || || || || ||||| |||||||| | || || |||| || ||| || Sbjct 387239 CGTCTGATTTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCCGACTACAACATC 387180 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 387179 CAGAAGGAGTCGACCCTTCACCTGGT 387154 Score = 140 bits (154), Expect = 8e-28 Identities = 155/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || || || || ||||||||||| | || || ||| || ||| Sbjct 386903 CAGATTTTCGTCAAGACCCTGACCGGCAAAACGATCACTTTGGAAGTTGAATCGTCCGAC 386844 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| |||||||||||||| || || |||||||| ||||| || Sbjct 386843 ACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCTCCTGACCAACAG 386784 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || ||||| || || || || ||||||||| | || ||| | || || ||| || Sbjct 386783 CGCTTGATTTTCGCTGGCAAGCAACTGGAAGATGGACGCACCCTTTCAGACTACAACATC 386724 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || ||||| || || || || || ||| Sbjct 386723 CAGAAAGAGTCCACTCTCCACCTGGTT 386697 Score = 127 bits (140), Expect = 5e-24 Identities = 152/205 (74%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||||| || || || ||||| || || || || || ||| ||| Sbjct 387131 CAGATCTTCGTCAAGACTCTGACCGGCAAGACGATTACTCTGGAAGTCGAGTCCTCTGAC 387072 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| |||||||||||||| || || |||||||| ||||| || Sbjct 387071 ACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCTCCTGACCAACAG 387012 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || ||||| || ||||| | || ||| |||| || ||| | Sbjct 387011 CGTCTGATCTTTGCTGGCAAGCAGCTAGAGGATGGCCGCACCCTTTCCGACTACAACATT 386952 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || || || |||| Sbjct 386951 CAGAAGGAGTCGACCCTTCA-CTTG 386928 >seq5 Length=3884132 Score = 140 bits (154), Expect = 8e-28 Identities = 139/180 (77%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988 |||||| || || || || || || || |||||||| ||||| || ||| |||||||| Sbjct 2696775 TTTCGTCAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCTGACACCAT 2696716 Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048 ||| || ||||| ||||| |||||||| ||||| |||||||||||||| || || || Sbjct 2696715 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATCCCTCCGGACCAACAGCGCCT 2696656 Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 ||||| |||||||| ||||| || ||||| | |||||| ||| || ||| | || || Sbjct 2696655 GATCTTTGCCGGAAAGCAGCTTGAGGATGGTCGCACTCTTAGCGACTACAACATTCAGAA 2696596 >seq10 Length=2854447 Score = 96.9 bits (106), Expect = 8e-15 Identities = 91/115 (79%), Gaps = 1/115 (1%) Strand=Plus/Plus Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073 ||||| || ||||| || || ||||| ||||| || ||||||||||| || ||||||||| Sbjct 982414 GACAAGGAGGGAATTCCCCCTGACCAACAACGTCTGATCTTCGCCGGCAAGCAGCTCGAA 982473 Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128 || || | |||||| | ||||| ||| |||| || || || || ||||| |||| Sbjct 982474 GACGGCCGCACTCTTTCGGATTACAACATCCAGAAGGAGTCGACCCTGCA-CTTG 982527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203731014926328