Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07-
18] 9 sequences; 36,512,172 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq2 102 8e-17
>seq2
Length=6009755
Score = 102 bits (112), Expect = 8e-17
Identities = 201/295 (68%), Gaps = 7/295 (2%)
Strand=Plus/Minus
Query 16466 TCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCT 16525
||| | || || || ||||| || | | ||| | || ||||| |||||||| ||
Sbjct 3197046 TCGTTGATGTAGGTGTCAATGAGGAGAGAGTATGTCTCGGAGTGAATGTTCTCCATCATG 3196987
Query 16526 ATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTT--CCACGTAAAATCGTT 16583
||||| || ||||||||||||||||| || | || || |||| |||| ||| || |
Sbjct 3196986 ATCTGGAAACCATAGAAGCATCGAGCTTCAGGAATCTGAACTTCACCACTGAAA--CGCT 3196929
Query 16584 CCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAA 16643
| ||| ||||||||| |||||||| ||| |||||||| || || | | |||| |
Sbjct 3196928 CAACCAAGTTCTCATTGACGATACCATCAGAGGCAGCAAAGAAGGCGAGGACGTGCGAGA 3196869
Query 16644 TGAAATA---TTTTTCGTCAGATGTAAGAATATGCCAATCTTTTAAATCTTTGGATATAT 16700
| || || || ||||| | | | | ||| || | |||||||| || | ||
Sbjct 3196868 TAAAGTAGCGTTCATCGTCGTTCAGACGGTTGTTCCAGTCGTGCAAATCTTTCGAGAGAT 3196809
Query 16701 CCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAAT 16755
| | ||||| | ||||| ||| || | ||||| || ||||||| ||| ||
Sbjct 3196808 CGATCTCTTCGGCGGTCCAGAAGGAGGCTTCGGCCTTCTTGTACATTTGCCAGAT 3196754
Score = 93.3 bits (102), Expect = 4e-14
Identities = 290/442 (66%), Gaps = 18/442 (4%)
Strand=Plus/Minus
Query 15914 TGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTTCC 15973
|| || |||| ||| || || ||||||||||| || || || | | ||| || || |||
Sbjct 3197643 TGATAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGGCAAGAGAGATGTTCTCC 3197584
Query 15974 ATAAAATCAAAGGGATTAGTAGC-TGAAAATATCTTAGAGTACCCCAGTTCCGTAACTAA 16032
|| || |||||||| || || || | | || ||| || || || | ||| ||
Sbjct 3197583 ATGAAGTCAAAGGGGTTGGTGGCGTTGTAGTA-CTTCTTGTTGCCAAGAGC---AACCAA 3197528
Query 16033 TCTA---TCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTAT-AA 16088
| || || || || || || || || ||||| || | | || ||||| | ||
Sbjct 3197527 GAGACGGTCAGCAACGAACTCGATGTACTGGCACATCAACTTCGAGTTCATTCCGAGCAA 3197468
Query 16089 GTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGA 16148
|| | |||||||| | || || |||| |||||| || |||| || || |||||
Sbjct 3197467 AGCGCAG-GGAAGAGCGTCGGTCAAGAATTCTTGTTCAATGGCAACGGCGTCAACAATGA 3197409
Query 16149 TATCGGTGG----CTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACAC 16204
| || || | | | |||||| ||| ||||| || | | ||
Sbjct 3197408 TGTCTTCAATAATCTTGGGGCTAGGACGGTT----GTTGAGGTGGGAGAAGAGCAAGCAG 3197353
Query 16205 GCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCT 16264
|| |||||| || || || ||||| | |||||| |||||||| || || || ||
Sbjct 3197352 GCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATAAGCTCGTTGGAGAAGGTCAAGCCA 3197293
Query 16265 GGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATA 16324
||||| || |||||||| |||||||| || | ||||| || || || ||||| |||
Sbjct 3197292 GGCATCAAACCACGTTTCTTCAACCAGAAGATAGAGGCAAAAGAGCCAGAGAAGAAGATA 3197233
Query 16325 CCCTCAACAGATGCAAAAGCGA 16346
|||||||| | || || ||||
Sbjct 3197232 CCCTCAACGGCAGCGAATGCGA 3197211
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511414342465880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |