Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07- 18] 9 sequences; 36,512,172 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq2 102 8e-17 >seq2 Length=6009755 Score = 102 bits (112), Expect = 8e-17 Identities = 201/295 (68%), Gaps = 7/295 (2%) Strand=Plus/Minus Query 16466 TCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCT 16525 ||| | || || || ||||| || | | ||| | || ||||| |||||||| || Sbjct 3197046 TCGTTGATGTAGGTGTCAATGAGGAGAGAGTATGTCTCGGAGTGAATGTTCTCCATCATG 3196987 Query 16526 ATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTT--CCACGTAAAATCGTT 16583 ||||| || ||||||||||||||||| || | || || |||| |||| ||| || | Sbjct 3196986 ATCTGGAAACCATAGAAGCATCGAGCTTCAGGAATCTGAACTTCACCACTGAAA--CGCT 3196929 Query 16584 CCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAA 16643 | ||| ||||||||| |||||||| ||| |||||||| || || | | |||| | Sbjct 3196928 CAACCAAGTTCTCATTGACGATACCATCAGAGGCAGCAAAGAAGGCGAGGACGTGCGAGA 3196869 Query 16644 TGAAATA---TTTTTCGTCAGATGTAAGAATATGCCAATCTTTTAAATCTTTGGATATAT 16700 | || || || ||||| | | | | ||| || | |||||||| || | || Sbjct 3196868 TAAAGTAGCGTTCATCGTCGTTCAGACGGTTGTTCCAGTCGTGCAAATCTTTCGAGAGAT 3196809 Query 16701 CCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAAT 16755 | | ||||| | ||||| ||| || | ||||| || ||||||| ||| || Sbjct 3196808 CGATCTCTTCGGCGGTCCAGAAGGAGGCTTCGGCCTTCTTGTACATTTGCCAGAT 3196754 Score = 93.3 bits (102), Expect = 4e-14 Identities = 290/442 (66%), Gaps = 18/442 (4%) Strand=Plus/Minus Query 15914 TGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTTCC 15973 || || |||| ||| || || ||||||||||| || || || | | ||| || || ||| Sbjct 3197643 TGATAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGGCAAGAGAGATGTTCTCC 3197584 Query 15974 ATAAAATCAAAGGGATTAGTAGC-TGAAAATATCTTAGAGTACCCCAGTTCCGTAACTAA 16032 || || |||||||| || || || | | || ||| || || || | ||| || Sbjct 3197583 ATGAAGTCAAAGGGGTTGGTGGCGTTGTAGTA-CTTCTTGTTGCCAAGAGC---AACCAA 3197528 Query 16033 TCTA---TCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTAT-AA 16088 | || || || || || || || || ||||| || | | || ||||| | || Sbjct 3197527 GAGACGGTCAGCAACGAACTCGATGTACTGGCACATCAACTTCGAGTTCATTCCGAGCAA 3197468 Query 16089 GTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGA 16148 || | |||||||| | || || |||| |||||| || |||| || || ||||| Sbjct 3197467 AGCGCAG-GGAAGAGCGTCGGTCAAGAATTCTTGTTCAATGGCAACGGCGTCAACAATGA 3197409 Query 16149 TATCGGTGG----CTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACAC 16204 | || || | | | |||||| ||| ||||| || | | || Sbjct 3197408 TGTCTTCAATAATCTTGGGGCTAGGACGGTT----GTTGAGGTGGGAGAAGAGCAAGCAG 3197353 Query 16205 GCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCT 16264 || |||||| || || || ||||| | |||||| |||||||| || || || || Sbjct 3197352 GCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATAAGCTCGTTGGAGAAGGTCAAGCCA 3197293 Query 16265 GGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATA 16324 ||||| || |||||||| |||||||| || | ||||| || || || ||||| ||| Sbjct 3197292 GGCATCAAACCACGTTTCTTCAACCAGAAGATAGAGGCAAAAGAGCCAGAGAAGAAGATA 3197233 Query 16325 CCCTCAACAGATGCAAAAGCGA 16346 |||||||| | || || |||| Sbjct 3197232 CCCTCAACGGCAGCGAATGCGA 3197211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511414342465880