Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07- 18] 9 sequences; 36,512,172 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq1 187 3e-42 >seq1 Length=7684667 Score = 187 bits (206), Expect = 3e-42 Identities = 740/1150 (64%), Gaps = 22/1150 (2%) Strand=Plus/Plus Query 53705 GCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 53764 |||| || |||| ||| || || || ||||||| || | | |||| || ||||| Sbjct 4026303 GCAAGGGAAGCCAAATTGCAGACAGCAACCTCATCAGGAGCACAGTATTCAATAATCTCT 4026362 Query 53765 GTGCAAAGATT---ACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTA 53821 ||||| || || ||||| ||| || || | || | ||| || ||||| ||||| Sbjct 4026363 GTGCAGAGGTTGGAACTACG---GATAGTACCGAGGTTCTTTTGGTTGCTCTTCTTGTTG 4026419 Query 53822 CACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCT 53881 || |||||||| || || ||||| || ||||||| ||| |||| | || | || || Sbjct 4026420 CAAGCATCCTTGTAGAGCATGAACGGGTTACCAGTCTCAGTCTGAGCCTCGAGGATGGCG 4026479 Query 53882 TTCCAGACGACACGAGCCTTTATTATA-GATTTGTATCTCTTTTCTCTTTCGTATAGTGT 53940 | ||||| ||||||| | || || | | || | || ||||| Sbjct 4026480 TACCAGAGCTTCTGAGCCTTGACGGTACGACGACCACGACCTTCC-CTCTCGTACTTCTC 4026538 Query 53941 ATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACA 54000 ||||| |||||||| || || | || | | | | || | | || | || || Sbjct 4026539 GTACAAAGCATCAAACTCTTCGCCGTAGACGTCGGCAAGACCGGAAGCCTCGTTAGGGCA 4026598 Query 54001 CATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAG 54060 | ||| | ||| || || | | || || ||| ||||||||||| |||| | Sbjct 4026599 GAACAATGTCCAGTCCTGGTTGGCTTCTACACGACGCATGAAGAGATCAGGGGTCCACAA 4026658 Query 54061 AGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGA 54119 || ||| || ||||| | || | ||| || || || ||||| ||| || | Sbjct 4026659 GGC-ATAGAACAGATCACGGGCACGGACTTCTTCTTTGCCATGGTTCTTGCGAAGGTCAA 4026717 Query 54120 GGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTT 54179 ||||| | | || ||| || ||||| || || | ||| || | | | ||||| || | Sbjct 4026718 GGAACTCAAAAACATCCGAGTGCCAGGGCTCGAGGTAGATAGCAAACGCACCAGGGCGCT 4026777 Query 54180 TGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAA 54239 |||| ||||| || || | |||||| |||||||| || | ||||| | ||| || | || Sbjct 4026778 TGTTACCTCCTTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTGAGCATAGGCACAA 4026837 Query 54240 TACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATAT--TACT 54297 ||| || || | ||||||||| || ||| ||| ||| ||| ||| || | Sbjct 4026838 GACCGTTTGAAGTACCATTGGTTCCTCCGATGTAGGAACCAGTGGAACGGATGCGGTGGA 4026897 Query 54298 AATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATC 54357 ||||| |||| || || || || || ||||| | ||| ||| || | ||||| Sbjct 4026898 CATTGA--GACCAATACCACCGGCAGACTTGGAGATCATTGCACATGTCTTGAGAGTATC 4026955 Query 54358 ATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTG 54417 |||||| ||||| || || || ||| |||||| | || || || || | || | Sbjct 4026956 ATAGATACCCTCAATGCTGTCTTCCTTCATGTCCACAAGGAAGCAAGAAGCAAGCTGTGG 4027015 Query 54418 ACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAG 54477 ||| ||| || || || || || || ||||| ||||| || || |||| | ||| | Sbjct 4027016 TCGAGGAGTACCTGCGTTGAACAAAGTGGGAGACGCGTGTGTGAAGTATTTCTGAGACAT 4027075 Query 54478 TAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACG 54537 | ||||| ||||| || ||| || || | | ||||| || || || ||||| Sbjct 4027076 CAAGTTGTATGTCTCAATGGCTTTCTCGATGTTCTCGCCGTGAATACCAACGGCAACACG 4027135 Query 54538 CATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTT 54597 ||| | |||||| || || | ||| | | |||| || ||| | || | |||||| Sbjct 4027136 CATGATCATGTGTTGGGGACGTTCGGCAACCTTGCCATTGATTCTGAGGAGGTAGGAGCG 4027195 Query 54598 TTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGA 54657 ||| | ||| || ||||| || || | || ||||| || || |||| ||| | || Sbjct 4027196 TTCGAGAGTCTTGAAACCGAAGTATTGATAGTTGAAGTCACGGTCATAAACAATGGCCGA 4027255 Query 54658 GTTGAGTTTATCCTTATATTTGTTAAC---TACATCCATGGTAATACTTGAAATAATCGG 54714 ||| | || || || || | || ||| ||| | || | ||||| || || Sbjct 4027256 GTTCAATTCTTCTGCATGCTTCATGACAGTCTCATACAT-CTGATCC--GAAATCAT-GG 4027311 Query 54715 AGAATG-TTTCCCATTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCACTAA 54773 |||| || || || || ||||| |||| | | ||| | ||||| || || Sbjct 4027312 GTAATGCCTTATTGTTCTTGGGGTTGACGTAGTGGTACAGATCTTCAATCACAGCAGAAA 4027371 Query 54774 ATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCAT 54833 | | || || || | |||||||| || || ||||| || | |||||| || | || | Sbjct 4027372 ACTGCTTCTTGGTCTGCTTGTGTAGGTTGGAGACGGCGATACGAGCGGCGAGGACAGCGT 4027431 Query 54834 AATCCGGATG 54843 ||||||| || Sbjct 4027432 AATCCGGGTG 4027441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721533206320