Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07-
18] 9 sequences; 36,512,172 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq6 96.9 4e-15
seq4 87.8 2e-12
>seq6
Length=3820271
Score = 96.9 bits (106), Expect = 4e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
||||||||||| ||||| || | ||||| || | || || || ||||||||||||||
Sbjct 3142790 TCCTTTTGAATGTTGTAGTCGGAAAGAGTACGGCCATCTTCAAGTTGCTTACCAGCGAAA 3142731
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112
|| | |||||||||||| | || | || || ||||| |||||| |||| |
Sbjct 3142730 ATCAATCGCTGCTGGTCAGGAGGAATGCCTTCTTTGTCTTGGATTTTGGACTTGACGTTA 3142671
Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172
| | ||||| ||||| || || | ||||| || || || || || ||||| ||
Sbjct 3142670 TCGATGGTGTCTGAGGATTCGACTTCCAATGTGATCGTCTTTCCAGTGAGAGTCTTAACG 3142611
Query 43173 AAGATTTGCAT 43183
|||||||||||
Sbjct 3142610 AAGATTTGCAT 3142600
Score = 96.9 bits (106), Expect = 4e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027
||| | |||||| || | ||| |||||| || || |||||||||| ||||| || |
Sbjct 3143043 ACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACC 3142984
Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087
|| ||||| ||||||||||| || || | |||||||||||||| || | | ||||||
Sbjct 3142983 ATCTTCTAGTTGCTTACCAGCAAAAATCAATCGCTGCTGGTCGGGTGGGATACCCTCCTT 3142924
Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147
|| |||||| || | | | | ||||| |||||| || || | |||||
Sbjct 3142923 ATCTTGGATTTTGCTCTTCACATTGTCAATGGTGTCTGACGATTCGACTTCCAATGTGAT 3142864
Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| || || || | ||||| || || || |||||
Sbjct 3142863 AGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 3142828
Score = 95.1 bits (104), Expect = 1e-14
Identities = 140/193 (73%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
|| || || || ||||| || | || || || |||| || |||||||| ||||||||
Sbjct 3142562 TCTTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAAG 3142503
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111
|| | ||||||||||| | || | | |||||| ||| ||| | || | |||| |||
Sbjct 3142502 ATCAAACGCTGCTGGTCAGGAGGGATACCCTCCTTATCC-TGAATCTTGGACTTGA-CGT 3142445
Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170
| | | ||||| || ||||| || | |||||||| ||||| || || ||||| |
Sbjct 3142444 TGTCGATGGTGTCAGAGGACTCCACCTCAAGGGTGATGGTCTTGCCGGTAAGAGTCTTGA 3142385
Query 43171 CAAAGATTTGCAT 43183
|||||||||||||
Sbjct 3142384 CAAAGATTTGCAT 3142372
Score = 89.7 bits (98), Expect = 6e-13
Identities = 135/187 (72%), Gaps = 4/187 (2%)
Strand=Plus/Minus
Query 42999 TGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGT 43058
||||| ||||| |||| || || || |||| || |||||||| ||||| || || |
Sbjct 3142271 TGAATGTTGTAGTCAGAAAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATCAAA 3142212
Query 43059 CGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCA 43116
||||||||||| | || | || |||||||||| ||| | || | |||| ||| | | |
Sbjct 3142211 CGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC-TGAATCTTGGACTTGA-CGTTGTCGA 3142154
Query 43117 CCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGA 43176
|| || || ||||| || | |||||||| || || || || ||||| || ||||
Sbjct 3142153 TGGTATCAGAAGACTCCACCTCAAGGGTGATGGTCTTCCCAGTGAGGGTCTTGACGAAGA 3142094
Query 43177 TTTGCAT 43183
| |||||
Sbjct 3142093 TCTGCAT 3142087
>seq4
Length=4274674
Score = 87.8 bits (96), Expect = 2e-12
Identities = 128/181 (71%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053
|||| || || ||||| || | ||||| || | || || |||||||| || || || |
Sbjct 2700759 CCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCATCTTCAAGCTGCTTTCCGGCAAAGA 2700818
Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113
| || ||||||||||||| || | | |||||||||| ||| || |||| |
Sbjct 2700819 TCAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 2700878
Query 43114 CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAA 43173
| | |||||| || || || |||| |||||||| |||||||| || ||||| || |
Sbjct 2700879 CGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 2700938
Query 43174 A 43174
|
Sbjct 2700939 A 2700939
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571817535670520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |