Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07- 18] 9 sequences; 36,512,172 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq6 107 1e-18 seq4 89.7 3e-13 >seq6 Length=3820271 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || ||||| | ||| ||||||||| |||||||||||||| || |||| |||| Sbjct 3142583 AGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCGTCC 3142524 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | |||||| || ||||| || | ||||||||||| || | | |||||| || Sbjct 3142523 TCGAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGGATACCCTCCTTATCC 3142464 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | | | | || | || | || || || || | |||||||| Sbjct 3142463 TGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAGGACTCCACCTCAAGGGTGATGGTC 3142404 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||||||| ||||| || |||||||| ||||| Sbjct 3142403 TTGCCGGTAAGAGTCTTGACAAAGATTTGCAT 3142372 Score = 84.2 bits (92), Expect = 1e-11 Identities = 130/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 34204 CTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAG 34263 ||| ||||||||||| || || || |||| || | ||||||||| || || || | Sbjct 3142272 CTGAATGTTGTAGTCAGAAAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATCAA 3142213 Query 34264 CCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTAT 34323 ||||||||||| || | || ||||||||| ||||| ||| | | | | || Sbjct 3142212 ACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGAT 3142153 Query 34324 CGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGAT 34383 | ||| | || || || || | |||||||| || || ||||| || || || ||||| Sbjct 3142152 GGTATCAGAAGACTCCACCTCAAGGGTGATGGTCTTCCCAGTGAGGGTCTTGACGAAGAT 3142093 Query 34384 CTGCAT 34389 |||||| Sbjct 3142092 CTGCAT 3142087 >seq4 Length=4274674 Score = 89.7 bits (98), Expect = 3e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 34202 TTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATG 34261 ||||| |||||||||||||| || || | || || | |||||| || || || || Sbjct 2700761 TTCTGGATGTTGTAGTCGGAGAGAGTGCGACCATCTTCAAGCTGCTTTCCGGCAAAGATC 2700820 Query 34262 AGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCT 34321 || |||||||||||| ||| | | ||||||||| ||||| ||| | || | | Sbjct 2700821 AGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 2700880 Query 34322 ATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAA 34380 || | |||| || ||||| || | |||||||| ||||| ||||| || || || || Sbjct 2700881 ATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 2700939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323071964563040