Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07- 18] 9 sequences; 36,512,172 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1 273 2e-68 seq2 131 1e-25 seq6 107 2e-18 seq4 86.0 6e-12 >seq1 Length=7684667 Score = 273 bits (302), Expect = 2e-68 Identities = 584/868 (67%), Gaps = 16/868 (2%) Strand=Plus/Plus Query 23120 TGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACC 23179 |||||||| || ||||| | |||||||||||||||| |||| | || ||||| | Sbjct 4026402 TGGTTGCTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAACGGGTTACCAGTCTCAGTC 4026461 Query 23180 TGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAAC---ACGTCG--CACGTACC 23234 || | ||||| ||| || ||| | ||||||| | || ||| || |||| ||| Sbjct 4026462 TGAGCCTCGAGGATGGCGTACCAGAGCTTCTGAGCCTTGACGGTACGACGACCACG-ACC 4026520 Query 23235 TGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCA 23294 | || ||| ||||||| | |||||| || ||||| || | ||||| |||||| | Sbjct 4026521 TTCCCTCT----CGTACTTCTCGTACAAAGCATCAAACTCTTCGCCGTAGACGTCGGCAA 4026576 Query 23295 GGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCA 23354 | |||| | | | || || | | |||| || ||| || || | || Sbjct 4026577 GACCGGAAGCCTCGTTAGGGCAGAACAATGTCCAGTCCTGGTTGGCTTCTACACGACGCA 4026636 Query 23355 TAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGC 23414 | || ||||| || |||| | || |||||||| || ||||| || || || ||||||| Sbjct 4026637 TGAAGAGATCAGGGGTCCACAAGGCATAGAACAGATCACGGGCACGGACTTCTTCTTTGC 4026696 Query 23415 CGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAA 23474 | |||||| | || | || || || || |||| ||||| ||||||||||| | Sbjct 4026697 CATGGTTCTTGCGAAGGTCAAGGAACTCAAAAACATCCGAGTGCCAGGGCTCGAGGTAGA 4026756 Query 23475 CGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGT 23534 |||||||| || || | ||| || || || || |||||||| | ||| ||||||||| Sbjct 4026757 TAGCAAACGCACCAGGGCGCTTGTTACCTCCTTGGTCGACGTATCTGGCGGTGTTGTTGA 4026816 Query 23535 ACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAAC 23594 ||||||| ||||| ||||| |||||||| || | || || | | |||| Sbjct 4026817 ACACTCTGAGCATAGGCACAAGACCGTTTGAAGTACCATTGGTTCCTCCGATGTAGGAAC 4026876 Query 23595 CTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCG 23654 | | | || | | ||| || | || ||| || || ||| | || || || ||||| | Sbjct 4026877 CAGTGGAACGGATGCGGTGGACATTGAGACCAATACCACCGGCAGACTTGGAGATCATTG 4026936 Query 23655 CGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGA 23714 | ||| || ||||| || ||||| ||||| |||||||| || || | | || | || Sbjct 4026937 CACATGTCTTGAGAGTATCATAGATACCCTCAATGCTGTCTTCCTTCATGTCCACAAGGA 4026996 Query 23715 AACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCG 23774 | || |||| | || | | || ||| | || ||||| || || ||||| | Sbjct 4026997 AGCAAGAAGCAAGCTGTGGTCGAGGAGTACCTGCGTTGAACAAAGTGGGAGACGCGTGTG 4027056 Query 23775 TAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGT 23834 | |||||| | ||||| | ||||| || || ||||| || |||| ||| |||| Sbjct 4027057 TGAAGTATTTCTGAGACATCAAGTTGTATGTCTCAATGGCTTTCTCGATGTTCTCGCCGT 4027116 Query 23835 GTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCG---ACCGTGACGCCGT 23891 | ||||| | ||| || ||||| ||||||| ||| || | ||| ||| | ||| | Sbjct 4027117 GAATACCAACGGCAACACGCATGATCATGTGTTGGGGACGTTCGGCAACCTT---GCCAT 4027173 Query 23892 TAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGT 23951 | ||| ||| || || || |||| | || || || || || || | |||||| |||| Sbjct 4027174 TGATTCTGAGGAGGTAGGAGCGTTCGAGAGTCTTGAAACCGAAGTATTGATAGTTGAAGT 4027233 Query 23952 CACGATCGTGCACTATGGCCGAATTCAA 23979 |||| || | || |||||||| ||||| Sbjct 4027234 CACGGTCATAAACAATGGCCGAGTTCAA 4027261 >seq2 Length=6009755 Score = 131 bits (144), Expect = 1e-25 Identities = 314/466 (67%), Gaps = 18/466 (4%) Strand=Plus/Plus Query 57958 CCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCA 58017 |||| || || || | || |||| ||||| ||||| || ||||| ||||| || ||| Sbjct 3197190 CCACCTTTGCTCAGCGCCTTGTCGCATTCGCTGCCGTTGAGGGTATCTTCTTCTCTGGCT 3197249 Query 58018 GCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCA 58077 ||||| | || || ||| |||||||||| || ||||||| ||| |||| || || Sbjct 3197250 CTTTTGCCTCTATCTTCTGGTTGAAGAAACGTGGTTTGATGCCTGGCTTGACCTTCTCCA 3197309 Query 58078 ACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTC 58137 ||||| | || || || ||||||||||| || || || ||||| ||| | | | ||| | Sbjct 3197310 ACGAGCTTATCTCTCGTGACGAGGGTCTTCACACCGACTTTGCCTGCTTGCTCTTCTCCC 3197369 Query 58138 ACATTGTCAATAAACCGACGCGGGATC--GCATCTTG--GACATTATCACCGAGGCGGTC 58193 || |||| ||||| | | | | | ||| ||||| || || || || Sbjct 3197370 AC---CTCAA-CAACCGTCCTAGCCCCAAGATTATTGAAGACATCATTGTTGACGCCGTT 3197425 Query 58194 GCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAAT 58253 || || ||| | || || | ||||| || || || || ||||||| |||||| Sbjct 3197426 GCCATTGAACAAGAATTCTTGACCGACGCTCTTCCCTGCGCTTTGCTCGGAATGAACTCG 3197485 Query 58254 GATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGG- 58312 | ||||||| ||||||| ||||| ||||| ||| | || ||| | | || |||| Sbjct 3197486 AAGTTGATGTGCCAGTACATCGAGTTCGTTGCTGACCGTCTCTTGGTTG--CT-CTTGGC 3197542 Query 58313 ----AGAGCGTCATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCG 58368 ||| || | |||||| | | || || ||||| || ||| | ||||| || | Sbjct 3197543 AACAAGA-AGT-ACTACAACGCCACCAACCCCTTTGACTTCATGGAGAACATCTCTCTTG 3197600 Query 58369 AGGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAA 58414 |||||||| ||||| ||||| || ||| | || ||||| || Sbjct 3197601 CCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTATCAGAA 3197646 >seq6 Length=3820271 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| |||||||| || || || |||||||| | || || ||| | || Sbjct 3142600 ATGCAAATCTTCGTTAAGACTCTCACTGGAAAGACGATCACATTGGAAGTCGAATCCTCA 3142659 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | ||| ||||| |||||| | || || |||||| Sbjct 3142660 GACACCATCGATAACGTCAAGTCCAAAATCCAAGACAAAGAAGGCATTCCTCCTGACCAG 3142719 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| | || |||||||| || || | ||||| ||| | ||| || ||| Sbjct 3142720 CAGCGATTGATTTTCGCTGGTAAGCAACTTGAAGATGGCCGTACTCTTTCCGACTACAAC 3142779 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||||||| ||||| ||||| || || ||||| Sbjct 3142780 ATTCAAAAGGAATCCACTCTACACCTTGTACT 3142811 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || |||||||| || ||||| || |||||| | || || || | || Sbjct 3142372 ATGCAAATCTTTGTCAAGACTCTTACCGGCAAGACCATCACCCTTGAGGTGGAGTCCTCT 3142431 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||| ||||| || | || || |||||| Sbjct 3142432 GACACCATCGACAACGTCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCTCCTGACCAG 3142491 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||| | || |||||||| || ||| | || ||| || | ||| || ||| Sbjct 3142492 CAGCGTTTGATCTTCGCTGGAAAGCAGCTCGAGGACGGCCGTACCCTCTCCGACTACAAC 3142551 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || |||||||| |||||||| || || ||| | || | || |||| Sbjct 3142552 ATCCAGAAAGAATCCACTCTTCACCTTGTCCTTCGTCTCCGTGGTGGTA 3142600 >seq4 Length=4274674 Score = 86.0 bits (94), Expect = 6e-12 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260 |||||| ||||| || || ||||| || |||||| |||| || || | ||||||| | Sbjct 2700940 TTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCGACACCAT 2700881 Query 31261 CGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320 ||| | ||||| | || ||||||||| || | || ||||||||||||||||| Sbjct 2700880 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCT 2700821 Query 31321 AATATTCGCTGGCAAACAGTTGGAAGA 31347 || || || || || ||| | ||||| Sbjct 2700820 GATCTTTGCCGGAAAGCAGCTTGAAGA 2700794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766349851280