Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07-
18] 9 sequences; 36,512,172 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq1 273 2e-68
seq2 131 1e-25
seq6 107 2e-18
seq4 86.0 6e-12
>seq1
Length=7684667
Score = 273 bits (302), Expect = 2e-68
Identities = 584/868 (67%), Gaps = 16/868 (2%)
Strand=Plus/Plus
Query 23120 TGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACC 23179
|||||||| || ||||| | |||||||||||||||| |||| | || ||||| |
Sbjct 4026402 TGGTTGCTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAACGGGTTACCAGTCTCAGTC 4026461
Query 23180 TGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAAC---ACGTCG--CACGTACC 23234
|| | ||||| ||| || ||| | ||||||| | || ||| || |||| |||
Sbjct 4026462 TGAGCCTCGAGGATGGCGTACCAGAGCTTCTGAGCCTTGACGGTACGACGACCACG-ACC 4026520
Query 23235 TGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCA 23294
| || ||| ||||||| | |||||| || ||||| || | ||||| |||||| |
Sbjct 4026521 TTCCCTCT----CGTACTTCTCGTACAAAGCATCAAACTCTTCGCCGTAGACGTCGGCAA 4026576
Query 23295 GGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCA 23354
| |||| | | | || || | | |||| || ||| || || | ||
Sbjct 4026577 GACCGGAAGCCTCGTTAGGGCAGAACAATGTCCAGTCCTGGTTGGCTTCTACACGACGCA 4026636
Query 23355 TAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGC 23414
| || ||||| || |||| | || |||||||| || ||||| || || || |||||||
Sbjct 4026637 TGAAGAGATCAGGGGTCCACAAGGCATAGAACAGATCACGGGCACGGACTTCTTCTTTGC 4026696
Query 23415 CGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAA 23474
| |||||| | || | || || || || |||| ||||| ||||||||||| |
Sbjct 4026697 CATGGTTCTTGCGAAGGTCAAGGAACTCAAAAACATCCGAGTGCCAGGGCTCGAGGTAGA 4026756
Query 23475 CGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGT 23534
|||||||| || || | ||| || || || || |||||||| | ||| |||||||||
Sbjct 4026757 TAGCAAACGCACCAGGGCGCTTGTTACCTCCTTGGTCGACGTATCTGGCGGTGTTGTTGA 4026816
Query 23535 ACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAAC 23594
||||||| ||||| ||||| |||||||| || | || || | | ||||
Sbjct 4026817 ACACTCTGAGCATAGGCACAAGACCGTTTGAAGTACCATTGGTTCCTCCGATGTAGGAAC 4026876
Query 23595 CTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCG 23654
| | | || | | ||| || | || ||| || || ||| | || || || ||||| |
Sbjct 4026877 CAGTGGAACGGATGCGGTGGACATTGAGACCAATACCACCGGCAGACTTGGAGATCATTG 4026936
Query 23655 CGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGA 23714
| ||| || ||||| || ||||| ||||| |||||||| || || | | || | ||
Sbjct 4026937 CACATGTCTTGAGAGTATCATAGATACCCTCAATGCTGTCTTCCTTCATGTCCACAAGGA 4026996
Query 23715 AACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCG 23774
| || |||| | || | | || ||| | || ||||| || || ||||| |
Sbjct 4026997 AGCAAGAAGCAAGCTGTGGTCGAGGAGTACCTGCGTTGAACAAAGTGGGAGACGCGTGTG 4027056
Query 23775 TAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGT 23834
| |||||| | ||||| | ||||| || || ||||| || |||| ||| ||||
Sbjct 4027057 TGAAGTATTTCTGAGACATCAAGTTGTATGTCTCAATGGCTTTCTCGATGTTCTCGCCGT 4027116
Query 23835 GTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCG---ACCGTGACGCCGT 23891
| ||||| | ||| || ||||| ||||||| ||| || | ||| ||| | ||| |
Sbjct 4027117 GAATACCAACGGCAACACGCATGATCATGTGTTGGGGACGTTCGGCAACCTT---GCCAT 4027173
Query 23892 TAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGT 23951
| ||| ||| || || || |||| | || || || || || || | |||||| ||||
Sbjct 4027174 TGATTCTGAGGAGGTAGGAGCGTTCGAGAGTCTTGAAACCGAAGTATTGATAGTTGAAGT 4027233
Query 23952 CACGATCGTGCACTATGGCCGAATTCAA 23979
|||| || | || |||||||| |||||
Sbjct 4027234 CACGGTCATAAACAATGGCCGAGTTCAA 4027261
>seq2
Length=6009755
Score = 131 bits (144), Expect = 1e-25
Identities = 314/466 (67%), Gaps = 18/466 (4%)
Strand=Plus/Plus
Query 57958 CCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCA 58017
|||| || || || | || |||| ||||| ||||| || ||||| ||||| || |||
Sbjct 3197190 CCACCTTTGCTCAGCGCCTTGTCGCATTCGCTGCCGTTGAGGGTATCTTCTTCTCTGGCT 3197249
Query 58018 GCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCA 58077
||||| | || || ||| |||||||||| || ||||||| ||| |||| || ||
Sbjct 3197250 CTTTTGCCTCTATCTTCTGGTTGAAGAAACGTGGTTTGATGCCTGGCTTGACCTTCTCCA 3197309
Query 58078 ACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTC 58137
||||| | || || || ||||||||||| || || || ||||| ||| | | | ||| |
Sbjct 3197310 ACGAGCTTATCTCTCGTGACGAGGGTCTTCACACCGACTTTGCCTGCTTGCTCTTCTCCC 3197369
Query 58138 ACATTGTCAATAAACCGACGCGGGATC--GCATCTTG--GACATTATCACCGAGGCGGTC 58193
|| |||| ||||| | | | | | ||| ||||| || || || ||
Sbjct 3197370 AC---CTCAA-CAACCGTCCTAGCCCCAAGATTATTGAAGACATCATTGTTGACGCCGTT 3197425
Query 58194 GCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAAT 58253
|| || ||| | || || | ||||| || || || || ||||||| ||||||
Sbjct 3197426 GCCATTGAACAAGAATTCTTGACCGACGCTCTTCCCTGCGCTTTGCTCGGAATGAACTCG 3197485
Query 58254 GATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGG- 58312
| ||||||| ||||||| ||||| ||||| ||| | || ||| | | || ||||
Sbjct 3197486 AAGTTGATGTGCCAGTACATCGAGTTCGTTGCTGACCGTCTCTTGGTTG--CT-CTTGGC 3197542
Query 58313 ----AGAGCGTCATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCG 58368
||| || | |||||| | | || || ||||| || ||| | ||||| || |
Sbjct 3197543 AACAAGA-AGT-ACTACAACGCCACCAACCCCTTTGACTTCATGGAGAACATCTCTCTTG 3197600
Query 58369 AGGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAA 58414
|||||||| ||||| ||||| || ||| | || ||||| ||
Sbjct 3197601 CCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTATCAGAA 3197646
>seq6
Length=3820271
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||| |||||||| || || || |||||||| | || || ||| | ||
Sbjct 3142600 ATGCAAATCTTCGTTAAGACTCTCACTGGAAAGACGATCACATTGGAAGTCGAATCCTCA 3142659
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | ||||| | ||| ||||| |||||| | || || ||||||
Sbjct 3142660 GACACCATCGATAACGTCAAGTCCAAAATCCAAGACAAAGAAGGCATTCCTCCTGACCAG 3142719
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||||| | || |||||||| || || | ||||| ||| | ||| || |||
Sbjct 3142720 CAGCGATTGATTTTCGCTGGTAAGCAACTTGAAGATGGCCGTACTCTTTCCGACTACAAC 3142779
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|||||||| ||||| ||||| || || |||||
Sbjct 3142780 ATTCAAAAGGAATCCACTCTACACCTTGTACT 3142811
Score = 98.7 bits (108), Expect = 9e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| || || |||||||| || ||||| || |||||| | || || || | ||
Sbjct 3142372 ATGCAAATCTTTGTCAAGACTCTTACCGGCAAGACCATCACCCTTGAGGTGGAGTCCTCT 3142431
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | ||||| | || ||| ||||| || | || || ||||||
Sbjct 3142432 GACACCATCGACAACGTCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCTCCTGACCAG 3142491
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||| | || |||||||| || ||| | || ||| || | ||| || |||
Sbjct 3142492 CAGCGTTTGATCTTCGCTGGAAAGCAGCTCGAGGACGGCCGTACCCTCTCCGACTACAAC 3142551
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| || |||||||| |||||||| || || ||| | || | || ||||
Sbjct 3142552 ATCCAGAAAGAATCCACTCTTCACCTTGTCCTTCGTCTCCGTGGTGGTA 3142600
>seq4
Length=4274674
Score = 86.0 bits (94), Expect = 6e-12
Identities = 107/147 (73%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260
|||||| ||||| || || ||||| || |||||| |||| || || | ||||||| |
Sbjct 2700940 TTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCGACACCAT 2700881
Query 31261 CGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320
||| | ||||| | || ||||||||| || | || |||||||||||||||||
Sbjct 2700880 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCT 2700821
Query 31321 AATATTCGCTGGCAAACAGTTGGAAGA 31347
|| || || || || ||| | |||||
Sbjct 2700820 GATCTTTGCCGGAAAGCAGCTTGAAGA 2700794
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445766349851280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |