Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07-
18] 9 sequences; 36,512,172 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq2 114 1e-20
seq6 91.5 1e-13
>seq2
Length=6009755
Score = 114 bits (126), Expect = 1e-20
Identities = 344/526 (65%), Gaps = 15/526 (3%)
Strand=Plus/Plus
Query 52541 TTGACAATGTTCCGTGTGTGCGCAAAAAGGATGATTGGGCATTGAAATGGATCGAAAACG 52600
||| || ||||| || | ||||| |||| || ||||| || |||||| ||
Sbjct 3197124 TTGGCATAGTTCCCTGCATTCGCAAGAAGGCCGACTGGGCTCTGCGCTGGATCTCGGACA 3197183
Query 52601 ACAAAGCCACTTTTGCCGAACGTCTGGTCGCGTTTGCTATAGTGGAAGGTGTGttttttt 52660
| | |||| ||||| | || || ||||| || ||| || || ||| | || || |
Sbjct 3197184 AGGAGTCCACCTTTGCTCAGCGCCTTGTCGCATTCGCTGCCGTTGAGGGTATCTTCTTCT 3197243
Query 52661 CGGGTAGTTTTGCGGCAATATTTTACATCAA-AACCTTGGGCATAATGCCCGGCCTCACG 52719
| || |||||| | || || | | || || | ||| | ||||| ||| | ||
Sbjct 3197244 CTGGCTCTTTTGCCTCTATCTTCTGGTTGAAGAAACGTGGTT-TGATGCCTGGCTTGACC 3197302
Query 52720 TTTAGCAACGAGTTGATATCGCGCGACGAAGGAATGCACACAGATTTTGCGTGTTTG-TA 52778
|| ||||||| | || || || ||||| || | ||||| || ||||| || ||| |
Sbjct 3197303 TTCTCCAACGAGCTTATCTCTCGTGACGAGGGTCTTCACACCGACTTTGCCTGCTTGCTC 3197362
Query 52779 TTATAATACGCGCGTTAAAGAAAAATTGTCATATGAAAAA----ATTCTAGACATGTTTA 52834
|| | || | | || || ||| || || ||| |||||| ||
Sbjct 3197363 TTCTCCCAC-CTC-------AACAACCGTCCTAGCCCCAAGATTATTGAAGACATCATTG 3197414
Query 52835 AAGAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGG 52894
|| ||||| | ||||||| |||| || || || |||||| | ||| | ||| | |
Sbjct 3197415 TTGACGCCGTTGCCATTGAACAAGAATTCTTGACCGACGCTCTTCCCTGCGCTTTGCTCG 3197474
Query 52895 GCATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGC 52954
| |||||| ||| |||||||| ||||||||||||| ||||| ||| | || ||| |
Sbjct 3197475 GAATGAACTCGAAGTTGATGTGCCAGTACATCGAGTTCGTTGCTGACCGTCTCTTGGTTG 3197534
Query 52955 AGCTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATAT 53014
|| || | ||| ||||| || || ||||||||| || ||| | ||||| |
Sbjct 3197535 CTCTTGGCAACAAGAAGTACTACAACGCCACCAACCCCTTTGACTTCATGGAGAACATCT 3197594
Query 53015 CGCTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTA 53060
| || | ||||| || ||||| ||||||| ||||| || || ||
Sbjct 3197595 CTCTTGCCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTA 3197640
>seq6
Length=3820271
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || || | ||| | || | ||||| || || ||||| || ||||| || |||
Sbjct 3142598 CCACCACGGAGACGAAGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAG 3142539
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || | ||| |||||||| || ||||| |||||| ||| ||||| || |||||
Sbjct 3142538 AGGGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGG 3142479
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGT-TCCACTGTGTCGGTGGGCTCCAC 139716
|| || || || || ||| | || | || | | || | ||||| | || ||||||
Sbjct 3142478 ATACCCTCCTTATCC-TGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAGGACTCCAC 3142420
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
||||| ||| | ||||||||||| | || || || || |||||||||
Sbjct 3142419 CTCAAGGGTGATGGTCTTGCCGGTAAGAGTCTTGACAAAGATTTGCATA 3142371
Score = 82.4 bits (90), Expect = 8e-11
Identities = 114/157 (73%), Gaps = 2/157 (1%)
Strand=Plus/Minus
Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668
|||||||||||| || |||||| |||||| ||| ||||| || ||||| ||||| || ||
Sbjct 3142242 GTCTTCGAGCTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCAGGAGGAATGCCCTCCTT 3142183
Query 139669 GTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCA 139727
||| ||| | || | || | | || | || || | | ||||||||||| ||| |
Sbjct 3142182 GTC-CTGAATCTTGGACTTGACGTTGTCGATGGTATCAGAAGACTCCACCTCAAGGGTGA 3142124
Query 139728 CCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
||||| || || | || || ||||| || |||||
Sbjct 3142123 TGGTCTTCCCAGTGAGGGTCTTGACGAAGATCTGCAT 3142087
Score = 82.4 bits (90), Expect = 8e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| ||||| | ||| | || | ||| | || || || ||||||||||| || |||
Sbjct 3142826 CCACCTCGGAGACGGAGTACAAGGTGTAGAGTGGATTCCTTTTGAATGTTGTAGTCGGAA 3142767
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || | ||||| || || |||||||| | |||| || ||||| || |||||
Sbjct 3142766 AGAGTACGGCCATCTTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGAGGA 3142707
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|||||||||||||| |||||| || | | || | ||||| | || || ||
Sbjct 3142706 ATGCCTTCTTTGTCTTGGATTTTGGACTTGACGTTATCGATGGTGTCTGAGGATTCGACT 3142647
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| | || | |||||| || || | || || ||||| |||||||||
Sbjct 3142646 TCCAATGTGATCGTCTTTCCAGTGAGAGTCTTAACGAAGATTTGCATA 3142599
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496063944192800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |