Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07- 18] 9 sequences; 36,512,172 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq1 201 2e-46 >seq1 Length=7684667 Score = 201 bits (222), Expect = 2e-46 Identities = 750/1154 (65%), Gaps = 30/1154 (3%) Strand=Plus/Plus Query 71698 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCA 71757 |||| || |||| ||| || || || ||||||| || | | |||| ||||| || Sbjct 4026303 GCAAGGGAAGCCAAATTGCAGACAGCAACCTCATCAGGAGCACAGTATTCAATAATCTCT 4026362 Query 71758 GTGCAAAGATT---ACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTA 71814 ||||| || || ||||| ||| || || | || | ||| || ||||| ||||| Sbjct 4026363 GTGCAGAGGTTGGAACTACG---GATAGTACCGAGGTTCTTTTGGTTGCTCTTCTTGTTG 4026419 Query 71815 CACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCT 71874 || |||||||| || || || ||||| ||||||| ||| |||||| || | || || Sbjct 4026420 CAAGCATCCTTGTAGAGCATGAACGGGTTACCAGTCTCAGTCTGAGCCTCGAGGATGGCG 4026479 Query 71875 TTCCAGACGACTC-GAGCCTTTATTATATTCTTGTATCTCTT--TTCTCTTTCGTA-TTG 71930 | ||||| | || ||||||| | || | | | | ||| || ||||| || Sbjct 4026480 TACCAGA-GCTTCTGAGCCTTGACGGTA--CGACGACCACGACCTTCCCTCTCGTACTTC 4026536 Query 71931 T-GTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCG 71989 | ||| | || | | | ||||| || || | | | | | | || | | || || | Sbjct 4026537 TCGTACA-AAGCAT-CAAACTCTTCGCCGTAGACGTCGGCAAGACCGGAAGCCTCGTTAG 4026594 Query 71990 GACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCC 72049 | || | ||||| ||| || | | | ||| || ||| ||||||||||| ||| Sbjct 4026595 GGCAGAACAATGTCCAGTCCTGGTTGGCTTCTACACGACGCATGAAGAGATCAGGGGTCC 4026654 Query 72050 AAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGA 72108 | | || ||| || ||||| | || | || || || || ||||| ||| Sbjct 4026655 ACAAGGC-ATAGAACAGATCACGGGCACGGACTTCTTCTTTGCCATGGTTCTTGCGAAGG 4026713 Query 72109 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGC 72168 || |||||| | | || ||| || ||||| || || | ||| || || | | || || Sbjct 4026714 TCAAGGAACTCAAAAACATCCGAGTGCCAGGGCTCGAGGTAGATAGCAAACGCACCAGGG 4026773 Query 72169 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 72228 || ||||| ||||| || || | |||||| |||||||| || | ||||| | ||| || Sbjct 4026774 CGCTTGTTACCTCCTTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTGAGCATAGGC 4026833 Query 72229 ATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATAT-- 72286 | || ||| || || | ||||||||| || ||| ||| ||| ||| ||| || Sbjct 4026834 ACAAGACCGTTTGAAGTACCATTGGTTCCTCCGATGTAGGAACCAGTGGAACGGATGCGG 4026893 Query 72287 TGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 72346 || ||||| |||| || || || || || ||||| | ||| ||| || | | Sbjct 4026894 TGGACATTGA--GACCAATACCACCGGCAGACTTGGAGATCATTGCACATGTCTTGAGAG 4026951 Query 72347 TATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTT 72406 |||||||||| ||||| || || || ||| |||||| | || || || || | | Sbjct 4026952 TATCATAGATACCCTCAATGCTGTCTTCCTTCATGTCCACAAGGAAGCAAGAAGCAAGCT 4027011 Query 72407 GGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAG 72466 | | ||| ||| || || || || || || ||||| ||||| || || |||| | || Sbjct 4027012 GTGGTCGAGGAGTACCTGCGTTGAACAAAGTGGGAGACGCGTGTGTGAAGTATTTCTGAG 4027071 Query 72467 ACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGA 72526 ||| | ||||| |||||||| ||| || || | | || || || || || | Sbjct 4027072 ACATCAAGTTGTATGTCTCAATGGCTTTCTCGATGTTCTCGCCGTGAATACCAACGGCAA 4027131 Query 72527 CACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGG 72586 ||||||| | ||| || || || | ||| | | |||| ||| ||| | | | ||||| Sbjct 4027132 CACGCATGATCATGTGTTGGGGACGTTCGGCAACCTTGCCATTGATTCTGAGGAGGTAGG 4027191 Query 72587 ATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAA 72646 | ||| | ||| || ||||| || || | || ||||| || || |||| ||| Sbjct 4027192 AGCGTTCGAGAGTCTTGAAACCGAAGTATTGATAGTTGAAGTCACGGTCATAAACAATGG 4027251 Query 72647 CCGAATTGAGTTTATCCTTATATTTGTTAACTAT---ATCCATGGTGATACTTGAAATAA 72703 |||| || | || || || || | || | || ||| |||| | ||||| | Sbjct 4027252 CCGAGTTCAATTCTTCTGCATGCTTCATGACAGTCTCATACAT-CTGATCC--GAAATCA 4027308 Query 72704 TCGGAGAATG-TTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCA 72762 | || |||| || || || || || || |||| | | | ||| || ||||| || Sbjct 4027309 T-GGGTAATGCCTTATTGTTCTTGGGGTTGACGTAGTGGTACAGATCTTCAATCACAGCA 4027367 Query 72763 CTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATG 72822 ||| | || || || | ||||||||| || || ||||| || | ||||| || | Sbjct 4027368 GAAAACTGCTTCTTGGTCTGCTTGTGTAGGTTGGAGACGGCGATACGAGCGGCGAGGACA 4027427 Query 72823 GCATAATCTGGATG 72836 || ||||| || || Sbjct 4027428 GCGTAATCCGGGTG 4027441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671139124496840