Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07-
18] 9 sequences; 36,512,172 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq2 188 1e-42
>seq2
Length=6009755
Score = 188 bits (208), Expect = 1e-42
Identities = 588/899 (65%), Gaps = 76/899 (8%)
Strand=Plus/Plus
Query 125013 CATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTC 125072
||| | || ||| |||||||||| ||||| | |||||||| ||||| | ||||||| ||
Sbjct 3196748 CATCAGATCTGGCAAATGTACAAGAAGGCCGAAGCCTCCTTCTGGACCGCCGAAGAGATC 3196807
Query 125073 GATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTT 125132
||||| || || || || |||| ||| | | ||| ||| || ||| || | |||
Sbjct 3196808 GATCTCTCGAAAGATTTGCACGACTGGAACAACCGTCTGAACGACGATGAACGCTACTTT 3196867
Query 125133 ATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAA-TCTGTT 125191
|| |||||| | | ||||||||||| | ||| ||||| |||||||| || || | |||
Sbjct 3196868 ATCTCGCACGTCCTCGCCTTCTTTGCTGCCTCTGATGGTATCGTCAATGAGAACTTGGTT 3196927
Query 125192 GACACGATTCTCTCAAG-AGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAA 125249
|| || ||| | | |||| | ||||| || | ||| ||||| || || |||||
Sbjct 3196928 GA-GCGTTTCAGTGGTGAAGTTCA-GATTCCTGAAG-CTCGATGCTTCTATGGTTTCCAG 3196984
Query 125250 ATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGC 125309
|||||||| |||||| | ||||| || | |||||| || ||||||| ||||| |
Sbjct 3196985 ATCATGATGGAGAACATTCACTCCGAGACATACTCTCTCCTCATTGACACCTACATCAAC 3197044
Query 125310 GATCC---GCAACGTA-----------------------AACA-CATGCTCTT------- 125335
|| || ||||||| |||| | | ||||
Sbjct 3197045 GAACCCAAACAACGTACCTACCTTTTCGACGCTATTGACAACAGTAAGTTCTTGCCTATG 3197104
Query 125336 ---TAACGC--------AATCGACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTG 125384
| |||| ||| | || || || | || || || ||||| | ||||
Sbjct 3197105 AAGTGACGCTCTGGTCTAATTGGCATAGTTCCCTGCATTCGCAAGAAGGCCGACTGGGCT 3197164
Query 125385 ATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCC 125444
| || |||||| ||| | |||| | | || | | || || |||||||| |||
Sbjct 3197165 CTGCGCTGGATCTCGGACAAGGAGTCCACCTTTGCTCAGCGCCTTGTCGCATTCGCTGCC 3197224
Query 125445 GTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGA 125504
|| ||||| |||||||| || || |||||| | ||||| ||| | ||||| || ||
Sbjct 3197225 GTTGAGGGTATCTTCTTCTCTGGCTCTTTTGCCTCTATCTTCTGGTTGAAGAAACGTGGT 3197284
Query 125505 CTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGT 125564
| ||||| || |||| | |||||| |||| ||||| |||||||| || |||
Sbjct 3197285 TTGATGCCTGGCTTGACCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGTCTTCACACC 3197344
Query 125565 GACTTTGCCATTCTACTGTT-TCGCAACTATCTGCGTCCCGAGTGC-AGATCCAGCGATG 125622
||||||||| | || || || || | || | || || | || ||| |||
Sbjct 3197345 GACTTTGCCTGCTTGCTCTTCTCCCACC--TCAACAACC---GTCCTAGCCCCA-AGATT 3197398
Query 125623 A-AAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAA 125681
| | | ||| |||||| || ||||| || |||||||| || | |||||
Sbjct 3197399 ATTGAAGACAT---CATTGT---TGACGCCGTTGCCATTGAACAAGAATTCTTGACCGAC 3197452
Query 125682 TCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACATAGAGTTT 125741
| || || | || | || ||||||| ||| | |||||| ||||||| |||||
Sbjct 3197453 GCTCTTCCCTGCGCTTTGCTCGGAATGAACTCGAAGTTGATGTGCCAGTACATCGAGTTC 3197512
Query 125742 GTGGCAGATCGTCTACTGTACGAGTTG--ATTGGCCGCAAGA---TTTACAACGCCAAGA 125796
|| || || ||||| || |||| ||||| ||||| |||||||||| |
Sbjct 3197513 GTTGCTGACCGTCTCTTG-----GTTGCTCTTGGCAACAAGAAGTACTACAACGCCACCA 3197567
Query 125797 ATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCGAGAAG 125855
| |||||||| |||||| | ||| || || | || ||||||||||| |||||||||
Sbjct 3197568 ACCCCTTTGACTTCATGGAGAACATCTCTCTTGCCGGCAAGACCAACTTCTTCGAGAAG 3197626
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741059116630840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |