Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07- 18] 9 sequences; 36,512,172 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq2 188 1e-42 >seq2 Length=6009755 Score = 188 bits (208), Expect = 1e-42 Identities = 588/899 (65%), Gaps = 76/899 (8%) Strand=Plus/Plus Query 125013 CATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTC 125072 ||| | || ||| |||||||||| ||||| | |||||||| ||||| | ||||||| || Sbjct 3196748 CATCAGATCTGGCAAATGTACAAGAAGGCCGAAGCCTCCTTCTGGACCGCCGAAGAGATC 3196807 Query 125073 GATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTT 125132 ||||| || || || || |||| ||| | | ||| ||| || ||| || | ||| Sbjct 3196808 GATCTCTCGAAAGATTTGCACGACTGGAACAACCGTCTGAACGACGATGAACGCTACTTT 3196867 Query 125133 ATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAA-TCTGTT 125191 || |||||| | | ||||||||||| | ||| ||||| |||||||| || || | ||| Sbjct 3196868 ATCTCGCACGTCCTCGCCTTCTTTGCTGCCTCTGATGGTATCGTCAATGAGAACTTGGTT 3196927 Query 125192 GACACGATTCTCTCAAG-AGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAA 125249 || || ||| | | |||| | ||||| || | ||| ||||| || || ||||| Sbjct 3196928 GA-GCGTTTCAGTGGTGAAGTTCA-GATTCCTGAAG-CTCGATGCTTCTATGGTTTCCAG 3196984 Query 125250 ATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGC 125309 |||||||| |||||| | ||||| || | |||||| || ||||||| ||||| | Sbjct 3196985 ATCATGATGGAGAACATTCACTCCGAGACATACTCTCTCCTCATTGACACCTACATCAAC 3197044 Query 125310 GATCC---GCAACGTA-----------------------AACA-CATGCTCTT------- 125335 || || ||||||| |||| | | |||| Sbjct 3197045 GAACCCAAACAACGTACCTACCTTTTCGACGCTATTGACAACAGTAAGTTCTTGCCTATG 3197104 Query 125336 ---TAACGC--------AATCGACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTG 125384 | |||| ||| | || || || | || || || ||||| | |||| Sbjct 3197105 AAGTGACGCTCTGGTCTAATTGGCATAGTTCCCTGCATTCGCAAGAAGGCCGACTGGGCT 3197164 Query 125385 ATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCC 125444 | || |||||| ||| | |||| | | || | | || || |||||||| ||| Sbjct 3197165 CTGCGCTGGATCTCGGACAAGGAGTCCACCTTTGCTCAGCGCCTTGTCGCATTCGCTGCC 3197224 Query 125445 GTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGA 125504 || ||||| |||||||| || || |||||| | ||||| ||| | ||||| || || Sbjct 3197225 GTTGAGGGTATCTTCTTCTCTGGCTCTTTTGCCTCTATCTTCTGGTTGAAGAAACGTGGT 3197284 Query 125505 CTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGT 125564 | ||||| || |||| | |||||| |||| ||||| |||||||| || ||| Sbjct 3197285 TTGATGCCTGGCTTGACCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGTCTTCACACC 3197344 Query 125565 GACTTTGCCATTCTACTGTT-TCGCAACTATCTGCGTCCCGAGTGC-AGATCCAGCGATG 125622 ||||||||| | || || || || | || | || || | || ||| ||| Sbjct 3197345 GACTTTGCCTGCTTGCTCTTCTCCCACC--TCAACAACC---GTCCTAGCCCCA-AGATT 3197398 Query 125623 A-AAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAA 125681 | | | ||| |||||| || ||||| || |||||||| || | ||||| Sbjct 3197399 ATTGAAGACAT---CATTGT---TGACGCCGTTGCCATTGAACAAGAATTCTTGACCGAC 3197452 Query 125682 TCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACATAGAGTTT 125741 | || || | || | || ||||||| ||| | |||||| ||||||| ||||| Sbjct 3197453 GCTCTTCCCTGCGCTTTGCTCGGAATGAACTCGAAGTTGATGTGCCAGTACATCGAGTTC 3197512 Query 125742 GTGGCAGATCGTCTACTGTACGAGTTG--ATTGGCCGCAAGA---TTTACAACGCCAAGA 125796 || || || ||||| || |||| ||||| ||||| |||||||||| | Sbjct 3197513 GTTGCTGACCGTCTCTTG-----GTTGCTCTTGGCAACAAGAAGTACTACAACGCCACCA 3197567 Query 125797 ATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCGAGAAG 125855 | |||||||| |||||| | ||| || || | || ||||||||||| ||||||||| Sbjct 3197568 ACCCCTTTGACTTCATGGAGAACATCTCTCTTGCCGGCAAGACCAACTTCTTCGAGAAG 3197626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741059116630840