Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07-
18] 9 sequences; 36,512,172 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq6 123 6e-23
seq2 89.7 1e-12
>seq6
Length=3820271
Score = 123 bits (136), Expect = 6e-23
Identities = 139/186 (75%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 104374 CTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAG 104433
|||||| || |||||||| || || | ||||||||| || || || |||||||| || |
Sbjct 3142272 CTGAATGTTGTAGTCAGAAAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATCAA 3142213
Query 104434 CCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTAC 104493
| ||| || |||||||| || || || || ||||||||||| | || || || || |
Sbjct 3142212 ACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGAT 3142153
Query 104494 GGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATAT 104553
|||||| || || ||||| || || || ||||| ||||| || || || || || ||
Sbjct 3142152 GGTATCAGAAGACTCCACCTCAAGGGTGATGGTCTTCCCAGTGAGGGTCTTGACGAAGAT 3142093
Query 104554 CTGCAT 104559
||||||
Sbjct 3142092 CTGCAT 3142087
Score = 118 bits (130), Expect = 2e-21
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || || || | || ||||||||||| || || ||||| || || || | |||||
Sbjct 3142584 AAGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCGTC 3142525
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
|| || || |||||||| || || | | ||| || |||||||| || || || |||||
Sbjct 3142524 CTCGAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGGATACCCTCCTTATC 3142465
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
||||||||| | || || || || | ||| || | || ||||| || || || ||
Sbjct 3142464 CTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAGGACTCCACCTCAAGGGTGATGGT 3142405
Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||| || ||||| || || ||||| || |||||
Sbjct 3142404 CTTGCCGGTAAGAGTCTTGACAAAGATTTGCAT 3142372
Score = 111 bits (122), Expect = 4e-19
Identities = 145/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| || || || ||||| ||||| | ||| ||||||||||| || |||
Sbjct 3143024 GTGGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACCATCTTCTAGTTGCTTACCA 3142965
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT-TT 104481
|||||||| | | ||| || || || || || || || ||||| || || |||||| ||
Sbjct 3142964 GCAAAAATCAATCGCTGCTGGTCGGGTGGGATACCCTCCTTATCTTGGAT-TTTGCTCTT 3142906
Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
||||| || | ||| || | ||| || || | ||| |||||||| || || | ||
Sbjct 3142905 CACATTGTCAATGGTGTCTGACGATTCGACTTCCAATGTGATAGTCTTTCCGGTCAAGGT 3142846
Query 104542 TTTTACAAATATCTGCAT 104559
|| || || ||||||||
Sbjct 3142845 CTTGACGAAAATCTGCAT 3142828
>seq2
Length=6009755
Score = 89.7 bits (98), Expect = 1e-12
Identities = 109/149 (73%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197
|| || || || || || || ||||| ||||| || || ||||||||| ||||||| |||
Sbjct 3197210 GTCGCATTCGCTGCCGTTGAGGGTATCTTCTTCTCTGGCTCTTTTGCCTCTATCTTCTGG 3197269
Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGAC 269257
||||||||| | || | ||||| || || || ||||| ||||| | || | |||
Sbjct 3197270 TTGAAGAAACGTGGTTTGATGCCTGGCTTGACCTTCTCCAACGAGCTTATCTCTCGTGAC 3197329
Query 269258 GAAGGTTTACACTGCGACTTCGCTTGttt 269286
|| ||| | ||| |||||| || || ||
Sbjct 3197330 GAGGGTCTTCACACCGACTTTGCCTGCTT 3197358
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151398267229372
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |