Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07- 18] 9 sequences; 36,512,172 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq6 123 6e-23 seq2 89.7 1e-12 >seq6 Length=3820271 Score = 123 bits (136), Expect = 6e-23 Identities = 139/186 (75%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 104374 CTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAG 104433 |||||| || |||||||| || || | ||||||||| || || || |||||||| || | Sbjct 3142272 CTGAATGTTGTAGTCAGAAAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATCAA 3142213 Query 104434 CCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTAC 104493 | ||| || |||||||| || || || || ||||||||||| | || || || || | Sbjct 3142212 ACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGAT 3142153 Query 104494 GGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATAT 104553 |||||| || || ||||| || || || ||||| ||||| || || || || || || Sbjct 3142152 GGTATCAGAAGACTCCACCTCAAGGGTGATGGTCTTCCCAGTGAGGGTCTTGACGAAGAT 3142093 Query 104554 CTGCAT 104559 |||||| Sbjct 3142092 CTGCAT 3142087 Score = 118 bits (130), Expect = 2e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || ||||||||||| || || ||||| || || || | ||||| Sbjct 3142584 AAGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCGTC 3142525 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || |||||||| || || | | ||| || |||||||| || || || ||||| Sbjct 3142524 CTCGAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGGATACCCTCCTTATC 3142465 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||||||| | || || || || | ||| || | || ||||| || || || || Sbjct 3142464 CTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAGGACTCCACCTCAAGGGTGATGGT 3142405 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| || ||||| || || ||||| || ||||| Sbjct 3142404 CTTGCCGGTAAGAGTCTTGACAAAGATTTGCAT 3142372 Score = 111 bits (122), Expect = 4e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || || ||||| ||||| | ||| ||||||||||| || ||| Sbjct 3143024 GTGGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACCATCTTCTAGTTGCTTACCA 3142965 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT-TT 104481 |||||||| | | ||| || || || || || || || ||||| || || |||||| || Sbjct 3142964 GCAAAAATCAATCGCTGCTGGTCGGGTGGGATACCCTCCTTATCTTGGAT-TTTGCTCTT 3142906 Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | ||| || | ||| || || | ||| |||||||| || || | || Sbjct 3142905 CACATTGTCAATGGTGTCTGACGATTCGACTTCCAATGTGATAGTCTTTCCGGTCAAGGT 3142846 Query 104542 TTTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 3142845 CTTGACGAAAATCTGCAT 3142828 >seq2 Length=6009755 Score = 89.7 bits (98), Expect = 1e-12 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197 || || || || || || || ||||| ||||| || || ||||||||| ||||||| ||| Sbjct 3197210 GTCGCATTCGCTGCCGTTGAGGGTATCTTCTTCTCTGGCTCTTTTGCCTCTATCTTCTGG 3197269 Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGAC 269257 ||||||||| | || | ||||| || || || ||||| ||||| | || | ||| Sbjct 3197270 TTGAAGAAACGTGGTTTGATGCCTGGCTTGACCTTCTCCAACGAGCTTATCTCTCGTGAC 3197329 Query 269258 GAAGGTTTACACTGCGACTTCGCTTGttt 269286 || ||| | ||| |||||| || || || Sbjct 3197330 GAGGGTCTTCACACCGACTTTGCCTGCTT 3197358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151398267229372