Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07-
18] 9 sequences; 36,512,172 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq2 178 2e-40
seq5 105 1e-18
>seq2
Length=6009755
Score = 178 bits (196), Expect = 2e-40
Identities = 191/250 (76%), Gaps = 2/250 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| || | ||||| | || || |||||||| || ||||||||||| |||||
Sbjct 2463464 GCCAAGCGTCACCGTAAGATCT-TGCGCGACAACATCCAGGGTATCACCAAGCCCGCTAT 2463406
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||| |||||||||||||| ||||||||| |||| | || |||| ||||| |
Sbjct 2463405 CCGCCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTACGAAGAAAC 2463346
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | ||| | |||| ||||||| || ||||||| |||||| || || || ||
Sbjct 2463345 CCGCGGTGTCCTCAAGACCTTCCTCGAGGGTGTTATCCGTGATGCCGTCACATACACTGA 2463286
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || || ||||||||||| || | ||| | ||||| || | || || || ||
Sbjct 2463285 GCACGCCAAGCGAAAGACTGTCACATCTCTCGATGTTGTCTACGCTCTCAAGCGACAGGG 2463226
Query 16672 CCGTAAGATT 16681
||||||| ||
Sbjct 2463225 CCGTAAGTTT 2463216
>seq5
Length=3951088
Score = 105 bits (116), Expect = 1e-18
Identities = 86/102 (84%), Gaps = 2/102 (2%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||| |||| ||| ||| || || |||||||| || ||||||||||| ||||
Sbjct 268482 CGCAAAGCGTCACCGCAAGAT-TCTCCGCGACAACATCCAGGGTATCACCAAGCCCGCTA 268540
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
| |||||||| || ||||||||||| ||||||||| | ||||
Sbjct 268541 TTCGTCGTCTTGCGCGTCGTGGTGGTGTCAAGCGTATTTCTG 268582
Score = 95.1 bits (104), Expect = 2e-15
Identities = 125/171 (73%), Gaps = 2/171 (1%)
Strand=Plus/Plus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATC-TTCCTCAAGACCGTTATCCATGAT 16594
|| |||| ||||| | |||| || | || ||| ||||| | |||| |||| |||
Sbjct 268660 TGATCTACGAAGAAACCCGTGGCGTCCTCAA-ATCATTCCTTGAATCCGTCATCCGTGAC 268718
Query 16595 GCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTAT 16654
|| || |||||||||||||| || | |||||||| || ||| ||||| ||||||||
Sbjct 268719 GCCGTCACTTATACCGAGCACGCCAAGAGGAAGACTGTGACTTCCTTGGATGTCGTCTAT 268778
Query 16655 GCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAATCTTCT 16705
|| | || || || ||||||| |||| || ||||| ||||| |||||
Sbjct 268779 GCGCTTAAGCGACAGGGCCGTACCCTTTACGGATTTGGCGGTTAAACTTCT 268829
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075191771237
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |