Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07- 18] 9 sequences; 36,512,172 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq1 226 4e-54 seq2 82.4 1e-10 >seq1 Length=7684667 Score = 226 bits (250), Expect = 4e-54 Identities = 751/1151 (65%), Gaps = 24/1151 (2%) Strand=Plus/Plus Query 62892 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 62951 |||| || |||| ||| || || || ||||||| || | | |||| || ||||| Sbjct 4026303 GCAAGGGAAGCCAAATTGCAGACAGCAACCTCATCAGGAGCACAGTATTCAATAATCTCT 4026362 Query 62952 GTGCAAAGATT---ACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTA 63008 ||||| || || ||||| |||||| || | || | ||| || ||||| ||||| Sbjct 4026363 GTGCAGAGGTTGGAACTACG---GATAGTACCGAGGTTCTTTTGGTTGCTCTTCTTGTTG 4026419 Query 63009 CACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCT 63068 || |||||||| || || ||||| || ||||||| ||| |||||| || | || || Sbjct 4026420 CAAGCATCCTTGTAGAGCATGAACGGGTTACCAGTCTCAGTCTGAGCCTCGAGGATGGCG 4026479 Query 63069 TTCCAGACGACTC-GAGCCTTTATTATA-GATTTGTATCTCCTTTCTCTTTCGTATAGTG 63126 | ||||| | || ||||||| | || || | |||| | || ||||| Sbjct 4026480 TACCAGA-GCTTCTGAGCCTTGACGGTACGACGACCACGACCTTCC-CTCTCGTACTTCT 4026537 Query 63127 TATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGAC 63186 ||||| || ||||| || || | || | | | | || | | || | || | Sbjct 4026538 CGTACAAAGCATCAAACTCTTCGCCGTAGACGTCGGCAAGACCGGAAGCCTCGTTAGGGC 4026597 Query 63187 ACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAA 63246 | | ||| | ||| || || | | || || ||| ||||||||||| |||| | Sbjct 4026598 AGAACAATGTCCAGTCCTGGTTGGCTTCTACACGACGCATGAAGAGATCAGGGGTCCACA 4026657 Query 63247 GAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCG 63305 || ||| || ||||| | || | ||| || || || ||||| ||| || Sbjct 4026658 AGGC-ATAGAACAGATCACGGGCACGGACTTCTTCTTTGCCATGGTTCTTGCGAAGGTCA 4026716 Query 63306 AGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGT 63365 |||||| | | || ||| || ||||| || || | ||| || || | | ||||| || Sbjct 4026717 AGGAACTCAAAAACATCCGAGTGCCAGGGCTCGAGGTAGATAGCAAACGCACCAGGGCGC 4026776 Query 63366 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATA 63425 ||||| ||||| || || | |||||| |||||||| || | ||||| | ||| || | | Sbjct 4026777 TTGTTACCTCCTTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTGAGCATAGGCACA 4026836 Query 63426 ATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATAT--TAC 63483 | ||||||||| |||||||||| || ||| ||| ||| ||| ||| || | Sbjct 4026837 AGACCGTTTGAAGTACCATTGGTTCCTCCGATGTAGGAACCAGTGGAACGGATGCGGTGG 4026896 Query 63484 TAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGT 63543 ||||| |||| || || || || || ||||| | ||| ||| || | || | Sbjct 4026897 ACATTGA--GACCAATACCACCGGCAGACTTGGAGATCATTGCACATGTCTTGAGAGTAT 4026954 Query 63544 CATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGT 63603 ||||||||||||| ||||| || || |||||| | || || || || | || Sbjct 4026955 CATAGATACCCTCAATGCTGTCTTCCTTCATGTCCACAAGGAAGCAAGAAGCAAGCTGTG 4027014 Query 63604 GACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAA 63663 | ||| ||| || || || || || || ||||| ||||| || || |||| | ||| | Sbjct 4027015 GTCGAGGAGTACCTGCGTTGAACAAAGTGGGAGACGCGTGTGTGAAGTATTTCTGAGACA 4027074 Query 63664 GTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACAC 63723 | ||||| |||||||| ||| || || | | ||||| || || || |||| Sbjct 4027075 TCAAGTTGTATGTCTCAATGGCTTTCTCGATGTTCTCGCCGTGAATACCAACGGCAACAC 4027134 Query 63724 GCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATT 63783 |||| | |||||| || || | ||| | | |||| || ||| | | | |||||| Sbjct 4027135 GCATGATCATGTGTTGGGGACGTTCGGCAACCTTGCCATTGATTCTGAGGAGGTAGGAGC 4027194 Query 63784 TTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCG 63843 ||| | ||| || ||||| || || | || ||||| || || |||| ||| ||| Sbjct 4027195 GTTCGAGAGTCTTGAAACCGAAGTATTGATAGTTGAAGTCACGGTCATAAACAATGGCCG 4027254 Query 63844 AGTTGAGTTTATCCTTATATTTGTTAACTAT---ATCCATGGTGATACTTGAAATAATCG 63900 |||| | || || || || | || | || ||| |||| | ||||| || | Sbjct 4027255 AGTTCAATTCTTCTGCATGCTTCATGACAGTCTCATACAT-CTGATCC--GAAATCAT-G 4027310 Query 63901 GAGAATG-TTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTA 63959 | |||| || || || || || || |||| | | | ||| || ||||| || | Sbjct 4027311 GGTAATGCCTTATTGTTCTTGGGGTTGACGTAGTGGTACAGATCTTCAATCACAGCAGAA 4027370 Query 63960 AATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCA 64019 || | || || || | ||||||||| || || ||||| || | ||||| || | || Sbjct 4027371 AACTGCTTCTTGGTCTGCTTGTGTAGGTTGGAGACGGCGATACGAGCGGCGAGGACAGCG 4027430 Query 64020 TAATCCGGATG 64030 |||||||| || Sbjct 4027431 TAATCCGGGTG 4027441 >seq2 Length=6009755 Score = 82.4 bits (90), Expect = 1e-10 Identities = 110/153 (72%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 33300 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 33359 ||| || || || ||| ||| ||||||||||| | | || || |||||||| || || Sbjct 3197359 CAAGCAGGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATAAGCTCGTTGGAGAAGGT 3197300 Query 33360 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAA 33419 | || ||||| | ||||| || || | ||| || || || || || || ||||| || Sbjct 3197299 CAAGCCAGGCATCAAACCACGTTTCTTCAACCAGAAGATAGAGGCAAAAGAGCCAGAGAA 3197240 Query 33420 GAAGATTCCTTCTACTGCAGCAAAGGCAATAAG 33452 |||||| || || || ||||| || || | ||| Sbjct 3197239 GAAGATACCCTCAACGGCAGCGAATGCGACAAG 3197207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622947129918440