Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07-
18] 9 sequences; 36,512,172 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq1 226 4e-54
seq2 82.4 1e-10
>seq1
Length=7684667
Score = 226 bits (250), Expect = 4e-54
Identities = 751/1151 (65%), Gaps = 24/1151 (2%)
Strand=Plus/Plus
Query 62892 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 62951
|||| || |||| ||| || || || ||||||| || | | |||| || |||||
Sbjct 4026303 GCAAGGGAAGCCAAATTGCAGACAGCAACCTCATCAGGAGCACAGTATTCAATAATCTCT 4026362
Query 62952 GTGCAAAGATT---ACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTA 63008
||||| || || ||||| |||||| || | || | ||| || ||||| |||||
Sbjct 4026363 GTGCAGAGGTTGGAACTACG---GATAGTACCGAGGTTCTTTTGGTTGCTCTTCTTGTTG 4026419
Query 63009 CACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCT 63068
|| |||||||| || || ||||| || ||||||| ||| |||||| || | || ||
Sbjct 4026420 CAAGCATCCTTGTAGAGCATGAACGGGTTACCAGTCTCAGTCTGAGCCTCGAGGATGGCG 4026479
Query 63069 TTCCAGACGACTC-GAGCCTTTATTATA-GATTTGTATCTCCTTTCTCTTTCGTATAGTG 63126
| ||||| | || ||||||| | || || | |||| | || |||||
Sbjct 4026480 TACCAGA-GCTTCTGAGCCTTGACGGTACGACGACCACGACCTTCC-CTCTCGTACTTCT 4026537
Query 63127 TATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGAC 63186
||||| || ||||| || || | || | | | | || | | || | || |
Sbjct 4026538 CGTACAAAGCATCAAACTCTTCGCCGTAGACGTCGGCAAGACCGGAAGCCTCGTTAGGGC 4026597
Query 63187 ACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAA 63246
| | ||| | ||| || || | | || || ||| ||||||||||| |||| |
Sbjct 4026598 AGAACAATGTCCAGTCCTGGTTGGCTTCTACACGACGCATGAAGAGATCAGGGGTCCACA 4026657
Query 63247 GAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCG 63305
|| ||| || ||||| | || | ||| || || || ||||| ||| ||
Sbjct 4026658 AGGC-ATAGAACAGATCACGGGCACGGACTTCTTCTTTGCCATGGTTCTTGCGAAGGTCA 4026716
Query 63306 AGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGT 63365
|||||| | | || ||| || ||||| || || | ||| || || | | ||||| ||
Sbjct 4026717 AGGAACTCAAAAACATCCGAGTGCCAGGGCTCGAGGTAGATAGCAAACGCACCAGGGCGC 4026776
Query 63366 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATA 63425
||||| ||||| || || | |||||| |||||||| || | ||||| | ||| || | |
Sbjct 4026777 TTGTTACCTCCTTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTGAGCATAGGCACA 4026836
Query 63426 ATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATAT--TAC 63483
| ||||||||| |||||||||| || ||| ||| ||| ||| ||| || |
Sbjct 4026837 AGACCGTTTGAAGTACCATTGGTTCCTCCGATGTAGGAACCAGTGGAACGGATGCGGTGG 4026896
Query 63484 TAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGT 63543
||||| |||| || || || || || ||||| | ||| ||| || | || |
Sbjct 4026897 ACATTGA--GACCAATACCACCGGCAGACTTGGAGATCATTGCACATGTCTTGAGAGTAT 4026954
Query 63544 CATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGT 63603
||||||||||||| ||||| || || |||||| | || || || || | ||
Sbjct 4026955 CATAGATACCCTCAATGCTGTCTTCCTTCATGTCCACAAGGAAGCAAGAAGCAAGCTGTG 4027014
Query 63604 GACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAA 63663
| ||| ||| || || || || || || ||||| ||||| || || |||| | ||| |
Sbjct 4027015 GTCGAGGAGTACCTGCGTTGAACAAAGTGGGAGACGCGTGTGTGAAGTATTTCTGAGACA 4027074
Query 63664 GTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACAC 63723
| ||||| |||||||| ||| || || | | ||||| || || || ||||
Sbjct 4027075 TCAAGTTGTATGTCTCAATGGCTTTCTCGATGTTCTCGCCGTGAATACCAACGGCAACAC 4027134
Query 63724 GCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATT 63783
|||| | |||||| || || | ||| | | |||| || ||| | | | ||||||
Sbjct 4027135 GCATGATCATGTGTTGGGGACGTTCGGCAACCTTGCCATTGATTCTGAGGAGGTAGGAGC 4027194
Query 63784 TTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCG 63843
||| | ||| || ||||| || || | || ||||| || || |||| ||| |||
Sbjct 4027195 GTTCGAGAGTCTTGAAACCGAAGTATTGATAGTTGAAGTCACGGTCATAAACAATGGCCG 4027254
Query 63844 AGTTGAGTTTATCCTTATATTTGTTAACTAT---ATCCATGGTGATACTTGAAATAATCG 63900
|||| | || || || || | || | || ||| |||| | ||||| || |
Sbjct 4027255 AGTTCAATTCTTCTGCATGCTTCATGACAGTCTCATACAT-CTGATCC--GAAATCAT-G 4027310
Query 63901 GAGAATG-TTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTA 63959
| |||| || || || || || || |||| | | | ||| || ||||| || |
Sbjct 4027311 GGTAATGCCTTATTGTTCTTGGGGTTGACGTAGTGGTACAGATCTTCAATCACAGCAGAA 4027370
Query 63960 AATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCA 64019
|| | || || || | ||||||||| || || ||||| || | ||||| || | ||
Sbjct 4027371 AACTGCTTCTTGGTCTGCTTGTGTAGGTTGGAGACGGCGATACGAGCGGCGAGGACAGCG 4027430
Query 64020 TAATCCGGATG 64030
|||||||| ||
Sbjct 4027431 TAATCCGGGTG 4027441
>seq2
Length=6009755
Score = 82.4 bits (90), Expect = 1e-10
Identities = 110/153 (72%), Gaps = 0/153 (0%)
Strand=Plus/Minus
Query 33300 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 33359
||| || || || ||| ||| ||||||||||| | | || || |||||||| || ||
Sbjct 3197359 CAAGCAGGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATAAGCTCGTTGGAGAAGGT 3197300
Query 33360 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAA 33419
| || ||||| | ||||| || || | ||| || || || || || || ||||| ||
Sbjct 3197299 CAAGCCAGGCATCAAACCACGTTTCTTCAACCAGAAGATAGAGGCAAAAGAGCCAGAGAA 3197240
Query 33420 GAAGATTCCTTCTACTGCAGCAAAGGCAATAAG 33452
|||||| || || || ||||| || || | |||
Sbjct 3197239 GAAGATACCCTCAACGGCAGCGAATGCGACAAG 3197207
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622947129918440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |