Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07- 18] 9 sequences; 36,512,172 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq6 104 2e-17 seq2 96.9 3e-15 seq1 93.3 4e-14 seq4 89.7 5e-13 >seq6 Length=3820271 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | || || || || || |||||||| ||| Sbjct 3142598 CCACCACGGAGACGAAGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAG 3142539 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || |||||| |||||||| || ||| |||| |||||||||||||| |||||| Sbjct 3142538 AGGGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGG 3142479 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || || || ||||| | || | || || | |||||| | Sbjct 3142478 ATACCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAGGACTCCACC 3142419 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || ||||| ||||| || || || || ||||| Sbjct 3142418 TCAAGGGTGATGGTCTTGCCGGTAAGAGTCTTGACAAAGATTTGCAT 3142372 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | |||| || || ||||||||||||||||| ||| Sbjct 3142826 CCACCTCGGAGACGGAGTACAAGGTGTAGAGTGGATTCCTTTTGAATGTTGTAGTCGGAA 3142767 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || || || || ||||| || ||| | || || ||||||||||| ||||| Sbjct 3142766 AGAGTACGGCCATCTTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGAGGA 3142707 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||||||||| |||||| ||||| | || | || || | ||| |||| Sbjct 3142706 ATGCCTTCTTTGTCTTGGATTTTGGACTTGACGTTATCGATGGTGTCTGAGGATTCGACT 3142647 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || || || ||||| || ||||| || ||||| Sbjct 3142646 TCCAATGTGATCGTCTTTCCAGTGAGAGTCTTAACGAAGATTTGCAT 3142600 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||| | ||| ||||| || || | ||| |||||||| || ||||||||||| Sbjct 3143055 GCCACCGCGGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGA 3142996 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||| || ||||| ||||| || || | || || ||||||||||| || || Sbjct 3142995 AAGAGTGCGACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCGCTGCTGGTCGGGTGG 3142936 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || || || |||||| ||| | | || | || || | || |||| Sbjct 3142935 GATACCCTCCTTATCTTGGATTTTGCTCTTCACATTGTCAATGGTGTCTGACGATTCGAC 3142876 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || ||||| | || || |||||||||||||| Sbjct 3142875 TTCCAATGTGATAGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 3142828 Score = 98.7 bits (108), Expect = 9e-16 Identities = 134/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 131050 TGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAA 131109 ||||||||||| || | |||||| ||| || ||||||||||| || |||| ||| Sbjct 3142271 TGAATGTTGTAGTCAGAAAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATCAAA 3142212 Query 131110 CGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACA 131169 ||||||||||| ||||| || || || ||||| || || ||||| | || | Sbjct 3142211 CGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATG 3142152 Query 131170 GTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATC 131229 ||||| | ||||| | || | ||| | ||| || || || || || || ||||| ||| Sbjct 3142151 GTATCAGAAGACTCCACCTCAAGGGTGATGGTCTTCCCAGTGAGGGTCTTGACGAAGATC 3142092 Query 131230 TGCATGA 131236 ||||||| Sbjct 3142091 TGCATGA 3142085 >seq2 Length=6009755 Score = 96.9 bits (106), Expect = 3e-15 Identities = 340/520 (65%), Gaps = 17/520 (3%) Strand=Plus/Plus Query 46087 CCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCA---ACAGCAGCACCGCG 46143 || ||| | |||||||| |||||||||| || |||||| ||| || | | Sbjct 3197135 CCCTGCATTCGCAAGAAGGCCGACTGGGCTCTGCGCTGGATCTCGGACA--AGGAGTCCA 3197192 Query 46144 ACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGT 46203 |||| || |||| | || || || || || ||||| |||| || |||||| | Sbjct 3197193 CCTTT-GCTCAGCGCCTTGTCGCATTCGCTGCCGTTGAGGGTATCTTCTTCTCTGGCTCT 3197251 Query 46204 TTTGCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAAC 46263 |||||| | ||||| | | || | || | ||||| ||| |||| || |||| Sbjct 3197252 TTTGCCTCTATCTTCTGGTTGAAGAAACGTGGTTTGATGCCTGGCTTGACCTTCTCCAAC 3197311 Query 46264 GAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACT 46323 ||||| || || || |||||||| || || || |||||||| || || | || | || Sbjct 3197312 GAGCTTATCTCTCGTGACGAGGGTCTTCACACCGACTTTGCCTG-CT-TGCTCTT---CT 3197366 Query 46324 CGCGTGCACGACAAGCTTGC--GCCCGACACCGTGCTGAG--CATGTTCAAGGAGGCGGT 46379 | | | | |||| | | | |||| | | | ||| ||| | || || || Sbjct 3197367 CCCAC-CTCAACAACCGTCCTAGCCCCA-AGATTATTGAAGACATCATTGTTGACGCCGT 3197424 Query 46380 GGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGC 46439 |||||||| | || || || || | ||| || ||| || |||| || |||||| | Sbjct 3197425 TGCCATTGAACAAGAATTCTTGACCGACGCTCTTCCCTGCGCTTTGCTCGGAATGAACTC 3197484 Query 46440 ACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCA 46499 ||| |||||| | ||||||||||| || || ||||| || | || ||| | | Sbjct 3197485 GAAGTTGATGTGCCAGTACATCGAGTTCGTTGCTGACCGTCTCTTGGTTGCTCTTGGCAA 3197544 Query 46500 GCCGAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGG 46559 |||| | | |||| ||| || ||||| || ||| | |||||||| || | || Sbjct 3197545 CAAGAAGTACTACAACGCCACCAACCCCTTTGACTTCATGGAGAACATCTCTCTTGCCGG 3197604 Query 46560 CAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTATAAG 46599 ||| || || || ||||| ||||| || || || ||| || Sbjct 3197605 CAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTATCAG 3197644 >seq1 Length=7684667 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || || || || | || |||||||| || |||||||| ||| Sbjct 2663216 CCACCACGGAGGCGGAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 2663275 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||| || |||||||| || ||| |||| |||||||||||||| || ||| Sbjct 2663276 AGGGTGCGGCCGTCTTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCGGGGGGG 2663335 Query 131128 ATTCCTTCTTTGTC 131141 || || || ||||| Sbjct 2663336 ATACCCTCCTTGTC 2663349 >seq4 Length=4274674 Score = 89.7 bits (98), Expect = 5e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||| | ||||| || || |||||||| || || ||| Sbjct 2700759 CCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCATCTTCAAGCTGCTTTCCGGCAAAGA 2700818 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | |||||||||||| || ||||| || || ||||| ||| || ||||| | | Sbjct 2700819 TCAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 2700878 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || |||| |||||||| |||| ||| | ||| || || || || || || |||| Sbjct 2700879 CGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 2700938 Query 131225 AA 131226 || Sbjct 2700939 AA 2700940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012746898560