Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07- 18] 9 sequences; 36,512,172 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq1 223 4e-53 >seq1 Length=7684667 Score = 223 bits (246), Expect = 4e-53 Identities = 748/1150 (65%), Gaps = 22/1150 (2%) Strand=Plus/Plus Query 62747 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 62806 |||| || |||| ||| || || || ||||||| || | | |||| || ||||| Sbjct 4026303 GCAAGGGAAGCCAAATTGCAGACAGCAACCTCATCAGGAGCACAGTATTCAATAATCTCT 4026362 Query 62807 GTGCAAAGATT---ACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTA 62863 ||||| || || ||||| ||| || || | || | ||| || ||||| ||||| Sbjct 4026363 GTGCAGAGGTTGGAACTACG---GATAGTACCGAGGTTCTTTTGGTTGCTCTTCTTGTTG 4026419 Query 62864 CACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCT 62923 || |||||||| || || ||||| || ||||||| ||| |||||| || | || || Sbjct 4026420 CAAGCATCCTTGTAGAGCATGAACGGGTTACCAGTCTCAGTCTGAGCCTCGAGGATGGCG 4026479 Query 62924 TTCCAGACGACTC-GAGCCTTTATTATA-GATTTGTATCTCTTTTCTCTTTCGTATAGTG 62981 | ||||| | || ||||||| | || || | | || | || ||||| Sbjct 4026480 TACCAGA-GCTTCTGAGCCTTGACGGTACGACGACCACGACCTTCC-CTCTCGTACTTCT 4026537 Query 62982 TATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGAC 63041 ||||| || ||||| || || | || | | | || || | | || | || | Sbjct 4026538 CGTACAAAGCATCAAACTCTTCGCCGTAGACGTCGGCAAGACCGGAAGCCTCGTTAGGGC 4026597 Query 63042 ACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAA 63101 | | ||| | ||| || || | | || || ||| ||||||||||| |||| | Sbjct 4026598 AGAACAATGTCCAGTCCTGGTTGGCTTCTACACGACGCATGAAGAGATCAGGGGTCCACA 4026657 Query 63102 GAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCG 63160 || ||| || ||||| | || | ||| || || || ||||| ||| || Sbjct 4026658 AGGC-ATAGAACAGATCACGGGCACGGACTTCTTCTTTGCCATGGTTCTTGCGAAGGTCA 4026716 Query 63161 AGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGT 63220 |||||| | | || ||| || ||||| || || | ||| || || | | ||||| || Sbjct 4026717 AGGAACTCAAAAACATCCGAGTGCCAGGGCTCGAGGTAGATAGCAAACGCACCAGGGCGC 4026776 Query 63221 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATA 63280 ||||| ||||| || || | |||||| |||||||| || | ||||| | ||| || | | Sbjct 4026777 TTGTTACCTCCTTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTGAGCATAGGCACA 4026836 Query 63281 ATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAAT--ATTAC 63338 | ||| || || ||||||||||| ||| ||| ||| ||| ||| ||| || | Sbjct 4026837 AGACCGTTTGAAGTACCATTGGTTCCTCCGATGTAGGAACCAGTGGAACGGATGCGGTGG 4026896 Query 63339 TAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTAT 63398 |||| ||||| || || || || || ||||| | ||| ||| || | |||| Sbjct 4026897 ACATTG--AGACCAATACCACCGGCAGACTTGGAGATCATTGCACATGTCTTGAGAGTAT 4026954 Query 63399 CATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGT 63458 ||||||| ||||| || || || ||| |||||| | || || || || | || Sbjct 4026955 CATAGATACCCTCAATGCTGTCTTCCTTCATGTCCACAAGGAAGCAAGAAGCAAGCTGTG 4027014 Query 63459 GACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAA 63518 | ||| ||| || || || || || || ||||| ||||| || || |||| | ||| | Sbjct 4027015 GTCGAGGAGTACCTGCGTTGAACAAAGTGGGAGACGCGTGTGTGAAGTATTTCTGAGACA 4027074 Query 63519 GTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACAC 63578 | ||||| |||||||| ||| || || | | ||||| || || || |||| Sbjct 4027075 TCAAGTTGTATGTCTCAATGGCTTTCTCGATGTTCTCGCCGTGAATACCAACGGCAACAC 4027134 Query 63579 GCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATT 63638 |||| | |||||| || || | ||| | | |||| || ||| | | | |||||| Sbjct 4027135 GCATGATCATGTGTTGGGGACGTTCGGCAACCTTGCCATTGATTCTGAGGAGGTAGGAGC 4027194 Query 63639 TTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCG 63698 ||| | ||| || ||||| || || | || ||||| || || |||| ||| ||| Sbjct 4027195 GTTCGAGAGTCTTGAAACCGAAGTATTGATAGTTGAAGTCACGGTCATAAACAATGGCCG 4027254 Query 63699 AGTTGAGTTTATCCTTATATTTGTTAAC---TACATCCATGGTAATACTTGAAATAATAG 63755 |||| | || || || || | || ||| ||| | || | ||||| || | Sbjct 4027255 AGTTCAATTCTTCTGCATGCTTCATGACAGTCTCATACAT-CTGATCC--GAAATCATGG 4027311 Query 63756 GAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAA 63815 | || || || || || ||||| |||| | | | ||| || ||||| || || Sbjct 4027312 GTAATGCCTTATTGTTCTTGGGGTTGACGTAGTGGTACAGATCTTCAATCACAGCAGAAA 4027371 Query 63816 ATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCAT 63875 | | || || || | |||||||| || || ||||| || | |||||| || | || | Sbjct 4027372 ACTGCTTCTTGGTCTGCTTGTGTAGGTTGGAGACGGCGATACGAGCGGCGAGGACAGCGT 4027431 Query 63876 AATCCGGATG 63885 ||||||| || Sbjct 4027432 AATCCGGGTG 4027441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631928716400