Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07-
18] 9 sequences; 36,512,172 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq2 127 2e-24
>seq2
Length=6009755
Score = 127 bits (140), Expect = 2e-24
Identities = 497/779 (64%), Gaps = 72/779 (9%)
Strand=Plus/Minus
Query 92927 TCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACGTACA 92986
||||| || || || |||||||| ||||||| | | |||||||| || | | | ||
Sbjct 3197520 TCAGCAACGAACTCGATGTACTGGCACATCAACTTCGAGTTCATTCCGAGCAAA-GCGCA 3197462
Query 92987 GGTA-GAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCT-- 93043
|| | |||||||||||||||| |||| || || ||||||| || | ||| |||
Sbjct 3197461 GGGAAGAGCGTCGGTCAAGAATTCTTGTTCAATGGCAACGGCGTCAACAATGATGTCTTC 3197402
Query 93044 ATTACTCTA----CTATTTGGTGGTTTTTGTACGACATAATTGTACATTAAGCACGCAAA 93099
| || ||| ||| | |||| ||| | | | | | ||||| |||||
Sbjct 3197401 AATAATCTTGGGGCTAG--GACGGTTGTTG----AGGTGGGAGAAGAGCAAGCAGGCAAA 3197348
Query 93100 GTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAA 93159
|||||| || | ||| ||||| || || || | ||| ||| ||| || || || || |
Sbjct 3197347 GTCGGTGTGAAGACCCTCGTCACGAGAGATAAGCTCGTTGGAGAAGGTCAAGCCAGGCAT 3197288
Query 93160 CAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTC 93219
|| || |||||||| | ||| || || || |||||| ||||| || || ||||| ||
Sbjct 3197287 CAAACCACGTTTCTTCAACCAGAAGATAGAGGCAAAAGAGCCAGAGAAGAAGATACCCTC 3197228
Query 93220 CACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG---CTGATCCA 93276
||||| || ||||| |||| || | ||||| | ||| | || ||||||
Sbjct 3197227 AACGGCAGCGAATGCGACAAGGCGCTGAGCAAA---GGTGGACTCCTTGTCCGAGATCCA 3197171
Query 93277 TTTTAAAGCCCAATCGGCTTTTTT------------------------------------ 93300
| |||||| ||||| || ||
Sbjct 3197170 GCGCAGAGCCCAGTCGGCCTTCTTGCGAATGCAGGGAACTATGCCAATTAGACCAGAGCG 3197111
Query 93301 ---CTTAATA--CAAG---GTAGTGTT-TCGATAGCGTTAAATAGGTAATCTCGCTCGTC 93351
||| ||| |||| || |||| || ||||||| || ||||| || | ||
Sbjct 3197110 TCACTTCATAGGCAAGAACTTACTGTTGTCAATAGCGTCGAAAAGGTAGGTACG-TTGTT 3197052
Query 93352 CGAATCTCGT--ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCC 93409
| | |||| ||||| || || || | ||||| || | || || || | ||||||
Sbjct 3197051 TGGGT-TCGTTGATGTAGGTGTCAATGAGGAGAGAGTATGTCTCGGAGTGAATGTTCTCC 3196993
Query 93410 ATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAAT 93469
|| || ||||| || ||||| |||| |||||| | ||||| ||||| | ||
Sbjct 3196992 ATCATGATCTGGAAACCATAGAAGCATCGAGCTTCAGGAATCTGAACTTCACCACTGAAA 3196933
Query 93470 CTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGC 93529
| ||| || | || |||||||| |||||||| || || ||||| || || | | |||
Sbjct 3196932 CGCTCAACCAAGTTCTCATTGACGATACCATCAGAGGCAGCAAAGAAGGCGAGGACGTGC 3196873
Query 93530 TTTATAAAATGTTTCTCATCATCTTT---AAGCTTATCCCAATCGGATAGATCTTTTGAA 93586
||||| | ||||| || || | | || | ||| ||| | |||||| ||
Sbjct 3196872 GAGATAAAGTAGCGTTCATCGTCGTTCAGACGGTTGTTCCAGTCGTGCAAATCTTTCGAG 3196813
Query 93587 AGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATAT 93645
||||||| |||||| | ||||| || || ||||| || || |||||||| | ||| ||
Sbjct 3196812 AGATCGATCTCTTCGGCGGTCCAGAAGGAGGCTTCGGCCTTCTTGTACATTTGCCAGAT 3196754
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556860737353160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |