Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07- 18] 9 sequences; 36,512,172 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq2 127 2e-24 >seq2 Length=6009755 Score = 127 bits (140), Expect = 2e-24 Identities = 497/779 (64%), Gaps = 72/779 (9%) Strand=Plus/Minus Query 92927 TCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACGTACA 92986 ||||| || || || |||||||| ||||||| | | |||||||| || | | | || Sbjct 3197520 TCAGCAACGAACTCGATGTACTGGCACATCAACTTCGAGTTCATTCCGAGCAAA-GCGCA 3197462 Query 92987 GGTA-GAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCT-- 93043 || | |||||||||||||||| |||| || || ||||||| || | ||| ||| Sbjct 3197461 GGGAAGAGCGTCGGTCAAGAATTCTTGTTCAATGGCAACGGCGTCAACAATGATGTCTTC 3197402 Query 93044 ATTACTCTA----CTATTTGGTGGTTTTTGTACGACATAATTGTACATTAAGCACGCAAA 93099 | || ||| ||| | |||| ||| | | | | | ||||| ||||| Sbjct 3197401 AATAATCTTGGGGCTAG--GACGGTTGTTG----AGGTGGGAGAAGAGCAAGCAGGCAAA 3197348 Query 93100 GTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAA 93159 |||||| || | ||| ||||| || || || | ||| ||| ||| || || || || | Sbjct 3197347 GTCGGTGTGAAGACCCTCGTCACGAGAGATAAGCTCGTTGGAGAAGGTCAAGCCAGGCAT 3197288 Query 93160 CAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTC 93219 || || |||||||| | ||| || || || |||||| ||||| || || ||||| || Sbjct 3197287 CAAACCACGTTTCTTCAACCAGAAGATAGAGGCAAAAGAGCCAGAGAAGAAGATACCCTC 3197228 Query 93220 CACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG---CTGATCCA 93276 ||||| || ||||| |||| || | ||||| | ||| | || |||||| Sbjct 3197227 AACGGCAGCGAATGCGACAAGGCGCTGAGCAAA---GGTGGACTCCTTGTCCGAGATCCA 3197171 Query 93277 TTTTAAAGCCCAATCGGCTTTTTT------------------------------------ 93300 | |||||| ||||| || || Sbjct 3197170 GCGCAGAGCCCAGTCGGCCTTCTTGCGAATGCAGGGAACTATGCCAATTAGACCAGAGCG 3197111 Query 93301 ---CTTAATA--CAAG---GTAGTGTT-TCGATAGCGTTAAATAGGTAATCTCGCTCGTC 93351 ||| ||| |||| || |||| || ||||||| || ||||| || | || Sbjct 3197110 TCACTTCATAGGCAAGAACTTACTGTTGTCAATAGCGTCGAAAAGGTAGGTACG-TTGTT 3197052 Query 93352 CGAATCTCGT--ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCC 93409 | | |||| ||||| || || || | ||||| || | || || || | |||||| Sbjct 3197051 TGGGT-TCGTTGATGTAGGTGTCAATGAGGAGAGAGTATGTCTCGGAGTGAATGTTCTCC 3196993 Query 93410 ATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAAT 93469 || || ||||| || ||||| |||| |||||| | ||||| ||||| | || Sbjct 3196992 ATCATGATCTGGAAACCATAGAAGCATCGAGCTTCAGGAATCTGAACTTCACCACTGAAA 3196933 Query 93470 CTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGC 93529 | ||| || | || |||||||| |||||||| || || ||||| || || | | ||| Sbjct 3196932 CGCTCAACCAAGTTCTCATTGACGATACCATCAGAGGCAGCAAAGAAGGCGAGGACGTGC 3196873 Query 93530 TTTATAAAATGTTTCTCATCATCTTT---AAGCTTATCCCAATCGGATAGATCTTTTGAA 93586 ||||| | ||||| || || | | || | ||| ||| | |||||| || Sbjct 3196872 GAGATAAAGTAGCGTTCATCGTCGTTCAGACGGTTGTTCCAGTCGTGCAAATCTTTCGAG 3196813 Query 93587 AGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATAT 93645 ||||||| |||||| | ||||| || || ||||| || || |||||||| | ||| || Sbjct 3196812 AGATCGATCTCTTCGGCGGTCCAGAAGGAGGCTTCGGCCTTCTTGTACATTTGCCAGAT 3196754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860737353160