Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07-
18] 9 sequences; 36,512,172 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq6 125 6e-24
seq4 100 2e-16
seq1 89.7 4e-13
>seq6
Length=3820271
Score = 125 bits (138), Expect = 6e-24
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||| || ||| | ||||| || || |||| ||||| ||||| || |
Sbjct 3142372 ATGCAAATCTTTGTCAAGACTCTTACCGGCAAGACCATCACCCTTGAGGTGGAGTCCTCT 3142431
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| | |||| || ||||| || ||||||||||| || || || ||
Sbjct 3142432 GACACCATCGACAACGTCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCTCCTGACCAG 3142491
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||| | || || || || || ||| | ||||| ||| ||| ||||||| ||||||
Sbjct 3142492 CAGCGTTTGATCTTCGCTGGAAAGCAGCTCGAGGACGGCCGTACCCTCTCCGACTACAAC 3142551
Query 22399 ATTCAAAAAGAATCCAC 22415
|| || |||||||||||
Sbjct 3142552 ATCCAGAAAGAATCCAC 3142568
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || || || || ||||| || || |||| | ||||| ||| | |
Sbjct 3142828 ATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACTATCACATTGGAAGTCGAATCGTCA 3142887
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| || | || ||||| ||||| ||||||||||| |||||||| ||
Sbjct 3142888 GACACCATTGACAATGTGAAGAGCAAAATCCAAGATAAGGAGGGTATCCCACCCGACCAG 3142947
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || | || ||||| || || || |||| ||| ||||| | || |||||||||
Sbjct 3142948 CAGCGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTCGCACTCTTTCTGATTACAAC 3143007
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| || || || |||||| | || || || | || | ||||| ||
Sbjct 3143008 ATCCAGAAGGAGTCCACCCTTCACTTGGTGCTCCGTCTCCGCGGTGG 3143054
Score = 105 bits (116), Expect = 6e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || ||||| ||| | || || || ||| |||| | ||||| ||| || |
Sbjct 3142600 ATGCAAATCTTCGTTAAGACTCTCACTGGAAAGACGATCACATTGGAAGTCGAATCCTCA 3142659
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || | |||| ||||| |||||||| || || ||||| || || ||
Sbjct 3142660 GACACCATCGATAACGTCAAGTCCAAAATCCAAGACAAAGAAGGCATTCCTCCTGACCAG 3142719
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || | || || || || || || | || ||| ||| || | ||||| ||||||
Sbjct 3142720 CAGCGATTGATTTTCGCTGGTAAGCAACTTGAAGATGGCCGTACTCTTTCCGACTACAAC 3142779
Query 22399 ATTCAAAAAGAATCCACCATACA 22421
|||||||| |||||||| ||||
Sbjct 3142780 ATTCAAAAGGAATCCACTCTACA 3142802
Score = 95.1 bits (104), Expect = 1e-14
Identities = 132/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || | || || || || |||| ||||| ||||| | |
Sbjct 3142087 ATGCAGATCTTCGTCAAGACCCTCACTGGGAAGACCATCACCCTTGAGGTGGAGTCTTCT 3142146
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | ||| | |||| || ||||| ||||||||||| ||||| || || ||
Sbjct 3142147 GATACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAG 3142206
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||| | || ||||| ||||| ||| | || || |||||| | || || ||||||
Sbjct 3142207 CAGCGTTTGATCTTTGCTGGCAAGCAGCTCGAAGACGGTCGCACCCTTTCTGACTACAAC 3142266
Query 22399 ATTCA 22403
|||||
Sbjct 3142267 ATTCA 3142271
>seq4
Length=4274674
Score = 100 bits (110), Expect = 2e-16
Identities = 130/180 (72%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286
||| || || || | || || || || |||| || || || || || |||| ||| |
Sbjct 2700940 TTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCGACACCAT 2700881
Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346
||| || |||| || || || |||||||||||||| || ||||| || || |||||
Sbjct 2700880 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCT 2700821
Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
|| |||||||| || ||| | || ||| ||||| ||||||| |||||||| || ||
Sbjct 2700820 GATCTTTGCCGGAAAGCAGCTTGAAGATGGTCGCACTCTCTCCGACTACAACATCCAGAA 2700761
>seq1
Length=7684667
Score = 89.7 bits (98), Expect = 4e-13
Identities = 85/109 (78%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 22307 TTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGT 22366
||| ||||||||||||||| || ||||| || || ||| | || || ||||| || |||
Sbjct 2663354 TTCCAGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTTTGATCTTCGCCGGAAAGCAGC 2663295
Query 22367 TAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415
| || || ||||||| ||||||| |||||||| || || || |||||
Sbjct 2663294 TCGAAGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCCAC 2663246
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727953961085
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |