Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07- 18] 9 sequences; 36,512,172 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq6 179 7e-40 seq4 147 4e-30 seq2 127 4e-24 seq1 89.7 9e-13 >seq6 Length=3820271 Score = 179 bits (198), Expect = 7e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | ||| | |||||| ||||| || ||||| ||||| || ||||| Sbjct 3142826 CCACCTCGGAGACGGAGTACAAGGTGTAGAGTGGATTCCTTTTGAATGTTGTAGTCGGAA 3142767 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | ||||| || ||||| || | || || ||||| || ||| Sbjct 3142766 AGAGTACGGCCATCTTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGAGGA 3142707 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||| |||||||| || || | ||||||| ||||||||||||| ||||| ||| Sbjct 3142706 ATGCCTTCTTTGTCTTGGATTTTGGACTTGACGTTATCGATGGTGTCTGAGGATTCGACT 3142647 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| ||||| || ||||| ||||| ||||| ||||| || ||||| Sbjct 3142646 TCCAATGTGATCGTCTTTCCAGTGAGAGTCTTAACGAAGATTTGCAT 3142600 Score = 176 bits (194), Expect = 8e-39 Identities = 181/234 (77%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 68229 TAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAA 68288 || || || ||||| || || | |||||||| || |||||||| || |||||||| ||| Sbjct 3143060 TAGTTGCCACCGCGGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAA 3143001 Query 68289 TCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCG 68348 || || || || | |||||||||| ||||| || || || || | || || |||||| Sbjct 3143000 TCAGAAAGAGTGCGACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCGCTGCTGGTCG 3142941 Query 68349 GGTGGAATGCCTTCCTTGTCTTGAATCTTTGC-CTTGACGGCCTCGATGGTGTCTGCTGA 68407 ||||| || || ||||| ||||| || ||||| ||| || || |||||||||| || Sbjct 3142940 GGTGGGATACCCTCCTTATCTTGGAT-TTTGCTCTTCACATTGTCAATGGTGTCTGACGA 3142882 Query 68408 TTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| |||||||| ||||| || ||||| || | |||||||||||| |||||||| Sbjct 3142881 TTCGACTTCCAATGTGATAGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 3142828 Score = 140 bits (154), Expect = 6e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || ||||| ||||| |||||||| || |||||| Sbjct 3142598 CCACCACGGAGACGAAGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAG 3142539 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| || ||||| || | | || ||||| || || Sbjct 3142538 AGGGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGG 3142479 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||| || |||||||| | ||||||| ||||||||||| | || || || Sbjct 3142478 ATACCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAGGACTCCACC 3142419 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| || || || || |||||||| || || ||||| Sbjct 3142418 TCAAGGGTGATGGTCTTGCCGGTAAGAGTCTTGACAAAGATTTGCAT 3142372 Score = 138 bits (152), Expect = 2e-27 Identities = 144/189 (76%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 68277 TGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGT 68336 || ||||| || || || || || | || ||||| | |||||| || || || || | Sbjct 3142271 TGAATGTTGTAGTCAGAAAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATCAAA 3142212 Query 68337 CTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATG 68396 | || ||||| || |||||||| |||||||| |||||||| | ||||||| |||||| Sbjct 3142211 CGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATG 3142152 Query 68397 GTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATC 68456 || || | || || || || | ||||||||| || || ||||||||||||||||| ||| Sbjct 3142151 GTATCAGAAGACTCCACCTCAAGGGTGATGGTCTTCCCAGTGAGGGTCTTGACGAAGATC 3142092 Query 68457 TGCATTATG 68465 ||||| ||| Sbjct 3142091 TGCATGATG 3142083 >seq4 Length=4274674 Score = 147 bits (162), Expect = 4e-30 Identities = 140/179 (78%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || |||||||| || | |||||||| | |||||| ||||| || || Sbjct 2700761 TTCTGGATGTTGTAGTCGGAGAGAGTGCGACCATCTTCAAGCTGCTTTCCGGCAAAGATC 2700820 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || |||||||| || || || |||||||| || ||||| | |||||| ||| Sbjct 2700821 AGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 2700880 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| | || || || || | ||||||||| || |||||||||||||||||||| Sbjct 2700881 ATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 2700939 >seq2 Length=6009755 Score = 127 bits (140), Expect = 4e-24 Identities = 185/260 (71%), Gaps = 1/260 (0%) Strand=Plus/Minus Query 9933 TTCATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCC 9992 |||||||| || |||||||| || || || || |||||||||||||| |||||| Sbjct 3197661 TTCATGACACCAGCCTTCTGATAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCG 3197602 Query 9993 TCGAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAA 10052 | || || ||| ||||||||||||||||||||| |||| | | ||| || Sbjct 3197601 GCAAGAGAGATGTTCTCCATGAAGTCAAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTG 3197542 Query 10053 CCGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAG 10112 || || || || | |||||||| ||||||||||||||||||| ||||| | |||| Sbjct 3197541 CCAAGAGCAACCAAGAGACGGTCAGCAACGAACTCGATGTACTGGCACATCAACTTCGAG 3197482 Query 10113 TTCATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACC 10172 ||||| || | || |||||| | |||||| | ||| || | ||| |||| || Sbjct 3197481 TTCATTCCGAGCAAAGCGCAGGGAAGAGCGTCGGTCAAGAATTCTTGTTCAATGGCAACG 3197422 Query 10173 GCTTCCTCGACGATGCTCTT 10192 || || | | |||| |||| Sbjct 3197421 GCGTCAACAATGATG-TCTT 3197403 Score = 87.8 bits (96), Expect = 3e-12 Identities = 121/169 (72%), Gaps = 8/169 (5%) Strand=Plus/Minus Query 10622 CAGGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAA 10681 || |||||| | || || ||||| | | ||||||||| |||||| |||| ||| || Sbjct 3196924 CAAGTTCTCATTGACGATACCATCAGAGGCAGCAAAGAAGGCGAGGACGTGCGAGATAAA 3196865 Query 10682 GTGGCGCTCATCATCGTTCAG----TTTTTCACGCCAGTCTACCACATCCTGGTTGAGCT 10737 || ||| ||||| |||||||| || ||| ||||| || ||| | ||| | Sbjct 3196864 GTAGCGTTCATCGTCGTTCAGACGGTTGTTC----CAGTCGTGCAAATCTTTCGAGAGAT 3196809 Query 10738 GGACCTCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCTTGTACATCTG 10786 || ||| || |||||||||| | ||| |||||||||||||||| || Sbjct 3196808 CGATCTCTTCGGCGGTCCAGAAGGAGGCTTCGGCCTTCTTGTACATTTG 3196760 >seq1 Length=7684667 Score = 89.7 bits (98), Expect = 9e-13 Identities = 157/226 (69%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 225414 TCTCGTAATGAACAATTGCCGAGCACACTGCGTCAAGGAAGCCAGAGTCGTGGGACACAA 225473 |||||||||| || ||| ||||||| | || | |||||| |||||||| |||| Sbjct 721040 TCTCGTAATGGTAGATATCCGTGCACACTTCATCCAAGAAGCCGGAGTCGTGACTGACAA 721099 Query 225474 TGATGGACGACACGTTCGTCAGGCCCTTGAGGTGCGTGATG-AGCCATGCCACGTTGCTG 225532 | | | | || || || ||||||||| | || |||||| || ||| Sbjct 721100 TCAAACTGGTGATGTCGGTGTGGGCCTTGAGGTAT-TCTTGTAGCCATTTGACATTGGCA 721158 Query 225533 ACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGATGTCAGCATCAATGAGGATGGCG 225592 ||||| | ||||| ||||||||||| || || || | ||| || | ||||| || || Sbjct 721159 ACGTCGAGATGGTTAGTAGGTTCGTCGAGGAGGAGAACGTCGGCTTTCATGAGCATAGCA 721218 Query 225593 CGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGACAGGGAGCCGA 225638 || | ||||| |||||||| ||||| || ||||| || || |||| Sbjct 721219 CGGGCGAGAGCGAGCTTCATCTTCCAACCACCGGAGAGTGATCCGA 721264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921622296317480