Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07-
18] 9 sequences; 36,512,172 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq6 179 7e-40
seq4 147 4e-30
seq2 127 4e-24
seq1 89.7 9e-13
>seq6
Length=3820271
Score = 179 bits (198), Expect = 7e-40
Identities = 176/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | ||| | |||||| ||||| || ||||| ||||| || |||||
Sbjct 3142826 CCACCTCGGAGACGGAGTACAAGGTGTAGAGTGGATTCCTTTTGAATGTTGTAGTCGGAA 3142767
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | |||||||| | ||||| || ||||| || | || || ||||| || |||
Sbjct 3142766 AGAGTACGGCCATCTTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGAGGA 3142707
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|||||||| |||||||| || || | ||||||| ||||||||||||| ||||| |||
Sbjct 3142706 ATGCCTTCTTTGTCTTGGATTTTGGACTTGACGTTATCGATGGTGTCTGAGGATTCGACT 3142647
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| ||||| || ||||| ||||| ||||| ||||| || |||||
Sbjct 3142646 TCCAATGTGATCGTCTTTCCAGTGAGAGTCTTAACGAAGATTTGCAT 3142600
Score = 176 bits (194), Expect = 8e-39
Identities = 181/234 (77%), Gaps = 2/234 (1%)
Strand=Plus/Minus
Query 68229 TAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAA 68288
|| || || ||||| || || | |||||||| || |||||||| || |||||||| |||
Sbjct 3143060 TAGTTGCCACCGCGGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAA 3143001
Query 68289 TCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCG 68348
|| || || || | |||||||||| ||||| || || || || | || || ||||||
Sbjct 3143000 TCAGAAAGAGTGCGACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCGCTGCTGGTCG 3142941
Query 68349 GGTGGAATGCCTTCCTTGTCTTGAATCTTTGC-CTTGACGGCCTCGATGGTGTCTGCTGA 68407
||||| || || ||||| ||||| || ||||| ||| || || |||||||||| ||
Sbjct 3142940 GGTGGGATACCCTCCTTATCTTGGAT-TTTGCTCTTCACATTGTCAATGGTGTCTGACGA 3142882
Query 68408 TTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||| |||||||| ||||| || ||||| || | |||||||||||| ||||||||
Sbjct 3142881 TTCGACTTCCAATGTGATAGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 3142828
Score = 140 bits (154), Expect = 6e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | || | ||| || ||||| ||||| |||||||| || ||||||
Sbjct 3142598 CCACCACGGAGACGAAGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAG 3142539
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| || ||||| || | | || ||||| || ||
Sbjct 3142538 AGGGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGG 3142479
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||| || |||||||| | ||||||| ||||||||||| | || || ||
Sbjct 3142478 ATACCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAGGACTCCACC 3142419
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||||||||| || || || || |||||||| || || |||||
Sbjct 3142418 TCAAGGGTGATGGTCTTGCCGGTAAGAGTCTTGACAAAGATTTGCAT 3142372
Score = 138 bits (152), Expect = 2e-27
Identities = 144/189 (76%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 68277 TGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGT 68336
|| ||||| || || || || || | || ||||| | |||||| || || || || |
Sbjct 3142271 TGAATGTTGTAGTCAGAAAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATCAAA 3142212
Query 68337 CTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATG 68396
| || ||||| || |||||||| |||||||| |||||||| | ||||||| ||||||
Sbjct 3142211 CGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATG 3142152
Query 68397 GTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATC 68456
|| || | || || || || | ||||||||| || || ||||||||||||||||| |||
Sbjct 3142151 GTATCAGAAGACTCCACCTCAAGGGTGATGGTCTTCCCAGTGAGGGTCTTGACGAAGATC 3142092
Query 68457 TGCATTATG 68465
||||| |||
Sbjct 3142091 TGCATGATG 3142083
>seq4
Length=4274674
Score = 147 bits (162), Expect = 4e-30
Identities = 140/179 (78%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
|| |||||||| || |||||||| || | |||||||| | |||||| ||||| || ||
Sbjct 2700761 TTCTGGATGTTGTAGTCGGAGAGAGTGCGACCATCTTCAAGCTGCTTTCCGGCAAAGATC 2700820
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
|| | || |||||||| || || || |||||||| || ||||| | |||||| |||
Sbjct 2700821 AGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 2700880
Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|||||||| | || || || || | ||||||||| || ||||||||||||||||||||
Sbjct 2700881 ATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 2700939
>seq2
Length=6009755
Score = 127 bits (140), Expect = 4e-24
Identities = 185/260 (71%), Gaps = 1/260 (0%)
Strand=Plus/Minus
Query 9933 TTCATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCC 9992
|||||||| || |||||||| || || || || |||||||||||||| ||||||
Sbjct 3197661 TTCATGACACCAGCCTTCTGATAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCG 3197602
Query 9993 TCGAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAA 10052
| || || ||| ||||||||||||||||||||| |||| | | ||| ||
Sbjct 3197601 GCAAGAGAGATGTTCTCCATGAAGTCAAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTG 3197542
Query 10053 CCGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAG 10112
|| || || || | |||||||| ||||||||||||||||||| ||||| | ||||
Sbjct 3197541 CCAAGAGCAACCAAGAGACGGTCAGCAACGAACTCGATGTACTGGCACATCAACTTCGAG 3197482
Query 10113 TTCATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACC 10172
||||| || | || |||||| | |||||| | ||| || | ||| |||| ||
Sbjct 3197481 TTCATTCCGAGCAAAGCGCAGGGAAGAGCGTCGGTCAAGAATTCTTGTTCAATGGCAACG 3197422
Query 10173 GCTTCCTCGACGATGCTCTT 10192
|| || | | |||| ||||
Sbjct 3197421 GCGTCAACAATGATG-TCTT 3197403
Score = 87.8 bits (96), Expect = 3e-12
Identities = 121/169 (72%), Gaps = 8/169 (5%)
Strand=Plus/Minus
Query 10622 CAGGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAA 10681
|| |||||| | || || ||||| | | ||||||||| |||||| |||| ||| ||
Sbjct 3196924 CAAGTTCTCATTGACGATACCATCAGAGGCAGCAAAGAAGGCGAGGACGTGCGAGATAAA 3196865
Query 10682 GTGGCGCTCATCATCGTTCAG----TTTTTCACGCCAGTCTACCACATCCTGGTTGAGCT 10737
|| ||| ||||| |||||||| || ||| ||||| || ||| | ||| |
Sbjct 3196864 GTAGCGTTCATCGTCGTTCAGACGGTTGTTC----CAGTCGTGCAAATCTTTCGAGAGAT 3196809
Query 10738 GGACCTCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCTTGTACATCTG 10786
|| ||| || |||||||||| | ||| |||||||||||||||| ||
Sbjct 3196808 CGATCTCTTCGGCGGTCCAGAAGGAGGCTTCGGCCTTCTTGTACATTTG 3196760
>seq1
Length=7684667
Score = 89.7 bits (98), Expect = 9e-13
Identities = 157/226 (69%), Gaps = 2/226 (1%)
Strand=Plus/Plus
Query 225414 TCTCGTAATGAACAATTGCCGAGCACACTGCGTCAAGGAAGCCAGAGTCGTGGGACACAA 225473
|||||||||| || ||| ||||||| | || | |||||| |||||||| ||||
Sbjct 721040 TCTCGTAATGGTAGATATCCGTGCACACTTCATCCAAGAAGCCGGAGTCGTGACTGACAA 721099
Query 225474 TGATGGACGACACGTTCGTCAGGCCCTTGAGGTGCGTGATG-AGCCATGCCACGTTGCTG 225532
| | | | || || || ||||||||| | || |||||| || |||
Sbjct 721100 TCAAACTGGTGATGTCGGTGTGGGCCTTGAGGTAT-TCTTGTAGCCATTTGACATTGGCA 721158
Query 225533 ACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGATGTCAGCATCAATGAGGATGGCG 225592
||||| | ||||| ||||||||||| || || || | ||| || | ||||| || ||
Sbjct 721159 ACGTCGAGATGGTTAGTAGGTTCGTCGAGGAGGAGAACGTCGGCTTTCATGAGCATAGCA 721218
Query 225593 CGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGACAGGGAGCCGA 225638
|| | ||||| |||||||| ||||| || ||||| || || ||||
Sbjct 721219 CGGGCGAGAGCGAGCTTCATCTTCCAACCACCGGAGAGTGATCCGA 721264
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921622296317480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |