Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07- 18] 9 sequences; 36,512,172 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq2 147 4e-30 seq1 136 7e-27 >seq2 Length=6009755 Score = 147 bits (162), Expect = 4e-30 Identities = 349/520 (67%), Gaps = 17/520 (3%) Strand=Plus/Plus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACG 42692 |||||||| |||||||| |||||||| || ||||||| | || | || Sbjct 3197135 CCCTGCATTCGCAAGAAGGCCGACTGGGCTCTGCGCTGGATCTCGGACAAGGAGTCCACC 3197194 Query 42693 TTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTC 42752 || | || | || || || || | ||||| ||||| ||||||||||| ||| | || Sbjct 3197195 TTTGCTCAGCGCCTTGTCGCATTCGCTGCCGTTGAGGGTATCTTCTTCTCTGGCTCTTTT 3197254 Query 42753 GCCTCCATCTTCTGGCTCAAGCAGAAGGTG--TCGATGCCCGGACTCACCTTCTCGAACG 42810 ||||| ||||||||| | ||| || ||| | |||||| || | |||||||| |||| Sbjct 3197255 GCCTCTATCTTCTGGTTGAAG--AAACGTGGTTTGATGCCTGGCTTGACCTTCTCCAACG 3197312 Query 42811 AACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCC 42870 | || ||| | |||||||| || || | |||||||||||| | || ||||| || Sbjct 3197313 AGCTTATCTCTCGTGACGAGGGTCTTCACACCGACTTTGCCTGCTTGCTCTTCTC---CC 3197369 Query 42871 ACCTCAGGCACAAGCCCTCGAAG----GAGCGGGTCCGGGCCATCATCACGGAGGCCGTG 42926 |||||| |||| || || || || | | |||||| || ||||| Sbjct 3197370 ACCTCA---ACAA-CCGTCCTAGCCCCAAGATTATTGAAGACATCATTGTTGACGCCGTT 3197425 Query 42927 GAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCAC 42986 | || || | || ||| | || | | || ||| | || |||| |||||| Sbjct 3197426 GCCATTGAACAAGAATTCTTGACCGACGCTCTTCCCTGCGCTTTGCTCGGAATGAACTCG 3197485 Query 42987 GACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCT 43045 | | |||||| |||||||| ||| ||| || |||| |||| | || | ||| Sbjct 3197486 AAGTTGATGTGCCAGTACATCGAGTTCGTTGCTGACCGTCTCTTGGTTGCTCTTGGCAAC 3197545 Query 43046 CAGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGG 43105 || | ||||||| | | |||||| ||||| |||||||||||||| | | || Sbjct 3197546 AAGAAG-TACTACAACGCCACCAACCCCTTTGACTTCATGGAGAACATCTCTCTTGCCGG 3197604 Query 43106 CAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 |||||||||||| ||||||||||| || | ||||| ||| Sbjct 3197605 CAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTATCAG 3197644 >seq1 Length=7684667 Score = 136 bits (150), Expect = 7e-27 Identities = 490/760 (64%), Gaps = 16/760 (2%) Strand=Plus/Plus Query 244688 GCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGG 244747 |||| |||||||| || ||||| || | ||| | | |||||| ||||||||| Sbjct 4026312 GCCAAATTGCAGACAGCAACCTCATCAGGAGCACAGTATTCAATAATCTCTGTGCAGAGG 4026371 Query 244748 TTACTGCACTT--GATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCT 244805 || | ||| ||| || || |||| || || ||| ||| |||||| || |||| Sbjct 4026372 TTG--GAACTACGGATAGTACCGAGGTTCTTTTGGTTGCTCTTCTTGTTGCAAGCATCCT 4026429 Query 244806 TGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGT 244865 ||||||||||||| || || ||||| ||| || |||||| | || |||||| | Sbjct 4026430 TGTAGAGCATGAACGGGTTACCAGTCTCAGTCTGAGCCTCGAGGATGGCGTACCAGAGCT 4026489 Query 244866 CCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCT 244925 | ||||||||| || | ||| | || || |||||| ||||| || | Sbjct 4026490 TCTGAGCCTTGACGGTACGACGACCACGACCTTCCCTCTCGTACTTCTCGTACAAAGCAT 4026549 Query 244926 CGAACTCGGGGCCCCAGACCTCGTCTAGGCCGG--GGCACGACGCCGGGCACATGAGACT 244983 | ||||| ||| |||| ||| | || |||| | | || ||||| | | | Sbjct 4026550 CAAACTCTTCGCCGTAGACGTCGGCAAGACCGGAAGCCTCGTTA--GGGCAGAACAATGT 4026607 Query 244984 CCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAA 245043 ||| || | | | | || | |||||||||| || ||| |||| | ||| | ||| Sbjct 4026608 CCAGTCCTGGTTGGCTTCTACACGACGCATGAAGAGATCAGGGGTCCACAAGGCATAGAA 4026667 Query 245044 GAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAA 245103 || || | || | || || |||| |||||| | || || | || ||||| Sbjct 4026668 CAGATCACGGGCACGGACTTCTTCTTTGCCATGGTTCTTGCGAAGGTCAAGGAACTCAAA 4026727 Query 245104 GACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCC 245163 || || |||||||||||| | ||||| ||| | || || || |||||||| ||||| Sbjct 4026728 AACATCCGAGTGCCAGGGCTCGAGGTAGATAGCAAACGCACCAGGGCGCTTGTTACCTCC 4026787 Query 245164 CTGGTCCACCATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGA 245223 ||||| || || || |||||| | | || ||||||| | ||||| || Sbjct 4026788 TTGGTCGACGTATCTGGCGGTGTTGTTGAACACTCTGAGCATAGGCACAAGACCGTTTGA 4026847 Query 245224 GTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACAT--- 245280 || ||||| || |||||||| || || | || ||| | ||||||| Sbjct 4026848 AGTACCATTGGTTCCTCCGATGTAGGAACCAGTGGAAC---GGATGC-GGTGGACATTGA 4026903 Query 245281 -GCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGC 245339 || | || ||||| ||||||||| | || || |||||| || || || | Sbjct 4026904 GACCAATACCACCGGCAGACTTGGAGATCATTGCACATGTCTTGAGAGTATCATAGATAC 4026963 Query 245340 CCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGC 245399 |||| |||||||| |||||||| | || ||||| || | ||||| || || Sbjct 4026964 CCTCAATGCTGTCTTCCTTCATGTCCACAAGGAAGCAAGAAGCAAGCTGTGGTCGAGGAG 4027023 Query 245400 TGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTA 245439 | | | |||||||| |||||| ||||| || ||||| Sbjct 4027024 TACCTGCGTTGAACAAAGTGGGAGACGCGTGTGTGAAGTA 4027063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944339093761840