Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07- 18] 9 sequences; 36,512,172 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq6 140 8e-28 seq4 107 5e-18 >seq6 Length=3820271 Score = 140 bits (154), Expect = 8e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || || |||| ||| |||||| ||||| || ||||||| | Sbjct 3142598 CCACCACGGAGACGAAGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAG 3142539 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | || ||||| |||||||||| |||||| || | ||| Sbjct 3142538 AGGGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGG 3142479 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || |||||||| || || | || ||||| || || | || || || || Sbjct 3142478 ATACCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAGGACTCCACC 3142419 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| ||||| ||||||||||| || || ||||| Sbjct 3142418 TCAAGGGTGATGGTCTTGCCGGTAAGAGTCTTGACAAAGATTTGCAT 3142372 Score = 125 bits (138), Expect = 2e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||||| || || | ||| ||| ||||| || || ||||||| Sbjct 3142826 CCACCTCGGAGACGGAGTACAAGGTGTAGAGTGGATTCCTTTTGAATGTTGTAGTCGGAA 3142767 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || ||||| | ||| || || ||||| |||| ||||| || | || Sbjct 3142766 AGAGTACGGCCATCTTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGAGGA 3142707 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || |||||||| || |||||||| | || ||||| || || | || ||||| ||| Sbjct 3142706 ATGCCTTCTTTGTCTTGGATTTTGGACTTGACGTTATCGATGGTGTCTGAGGATTCGACT 3142647 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | ||||||||||| || || |||||||| ||||| || ||||| Sbjct 3142646 TCCAATGTGATCGTCTTTCCAGTGAGAGTCTTAACGAAGATTTGCAT 3142600 Score = 125 bits (138), Expect = 2e-23 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || || | |||| ||| || || ||||| || || || | Sbjct 3143054 CCACCGCGGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGAA 3142995 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || ||||||| ||| || || || || |||| ||||| || |||| Sbjct 3142994 AGAGTGCGACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCGCTGCTGGTCGGGTGGG 3142935 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || || || ||||| |||||||| ||| ||||| || || || | || |||||| || Sbjct 3142934 ATACCCTCCTTATCTTGGATTTT-GCTCTTCACATTGTCAATGGTGTCTGACGATTCGAC 3142876 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| | ||||| ||||| ||||||| ||||||||||| |||||||| Sbjct 3142875 TTCCAATGTGATAGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 3142828 Score = 102 bits (112), Expect = 2e-16 Identities = 136/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 288289 TGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGA 288348 || || || ||||| | || ||||| |||||||| | || || || || ||||||| | Sbjct 3142271 TGAATGTTGTAGTCAGAAAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATCAAA 3142212 Query 288349 CGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATA 288408 ||||| || | || || || || || ||||| || || | || ||||| || || Sbjct 3142211 CGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATG 3142152 Query 288409 GAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATC 288468 | ||| || || || || || ||||| |||||||| || || ||||||||||| ||| Sbjct 3142151 GTATCAGAAGACTCCACCTCAAGGGTGATGGTCTTCCCAGTGAGGGTCTTGACGAAGATC 3142092 Query 288469 TGCATTATG 288477 ||||| ||| Sbjct 3142091 TGCATGATG 3142083 >seq4 Length=4274674 Score = 107 bits (118), Expect = 5e-18 Identities = 131/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || ||||||| ||| ||||| || ||||| | || ||||| || |||||| Sbjct 2700761 TTCTGGATGTTGTAGTCGGAGAGAGTGCGACCATCTTCAAGCTGCTTTCCGGCAAAGATC 2700820 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 |||||||| || ||||| || || || |||||||| || | || || || || Sbjct 2700821 AGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 2700880 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | ||| || || || ||||| ||||| ||||| || || || ||||||||||| Sbjct 2700881 ATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 2700939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179654263971102