Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07- 18] 9 sequences; 36,512,172 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq6 107 2e-18 seq4 86.0 6e-12 >seq6 Length=3820271 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||| |||||||||||||| || | | || || | |||||||| ||||| || Sbjct 3142796 GTGGATTCCTTTTGAATGTTGTAGTCGGAAAGAGTACGGCCATCTTCAAGTTGCTTACCA 3142737 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || |||| | ||||||||||| |||||||| |||||||| ||||| ||||| ||| Sbjct 3142736 GCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCTTCTTTGTCTTGGATTTTGGACTTG 3142677 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | || || || || ||||| | || | ||||| || || | ||| Sbjct 3142676 ACGTTATCGATGGTGTCTGAGGATTCGACTTCCAATGTGATCGTCTTTCCAGTGAGAGTC 3142617 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| |||||||| Sbjct 3142616 TTAACGAAGATTTGCAT 3142600 Score = 105 bits (116), Expect = 7e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || || |||| || |||||||| || |||||||| || | || ||| || |||| Sbjct 3142584 AAGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCGTC 3142525 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 || |||||||| || || | || | ||||||||||| ||||| || || || || || Sbjct 3142524 CTCGAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGGATACCCTCCTTATC 3142465 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || ||| || || | || ||| || ||||| || | || | ||| Sbjct 3142464 CTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAGGACTCCACCTCAAGGGTGATGGT 3142405 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||||||| | ||| || || || |||||||| Sbjct 3142404 CTTGCCGGTAAGAGTCTTGACAAAGATTTGCAT 3142372 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| | |||| || || || || || ||||||||||| | | ||||| | ||| Sbjct 3143039 AGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACCATCT 3142980 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || || ||||| || ||| |||| | |||||||||||||| || || || || || ||| Sbjct 3142979 TCTAGTTGCTTACCAGCAAAAATCAATCGCTGCTGGTCGGGTGGGATACCCTCCTTATCT 3142920 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || ||||| ||| ||| || | || || | || ||||| | || | ||| Sbjct 3142919 TGGATTTTGCTCTTCACATTGTCAATGGTGTCTGACGATTCGACTTCCAATGTGATAGTC 3142860 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || |||||||| || || |||||||| ||||| Sbjct 3142859 TTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 3142828 Score = 95.1 bits (104), Expect = 1e-14 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 64259 TGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGC 64318 ||||||||||| || | | |||||| ||||||| ||||||||||| ||| | || | Sbjct 3142271 TGAATGTTGTAGTCAGAAAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATCAAA 3142212 Query 64319 CGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACT 64378 ||||||||||| |||||||| || || || || || || || ||| || || | Sbjct 3142211 CGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATG 3142152 Query 64379 GTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATT 64438 |||||| | ||||| || | || | |||||| || || | || || ||||| || Sbjct 3142151 GTATCAGAAGACTCCACCTCAAGGGTGATGGTCTTCCCAGTGAGGGTCTTGACGAAGATC 3142092 Query 64439 TGCAT 64443 ||||| Sbjct 3142091 TGCAT 3142087 >seq4 Length=4274674 Score = 86.0 bits (94), Expect = 6e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 64256 TTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATG 64315 || || |||||||| || | || ||||| | |||||||||||||| |||||| | || Sbjct 2700761 TTCTGGATGTTGTAGTCGGAGAGAGTGCGACCATCTTCAAGCTGCTTTCCGGCAAAGATC 2700820 Query 64316 AGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCC 64375 || |||||||||||||| || || || || || || || || || ||| ||| || Sbjct 2700821 AGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 2700880 Query 64376 ACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAA 64435 | || || || || || || | || | ||||||||| || | || || |||||| Sbjct 2700881 ATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAA 2700940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644743789960