Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07- 18] 9 sequences; 36,512,172 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq2 152 5e-32 seq6 95.1 1e-14 >seq2 Length=6009755 Score = 152 bits (168), Expect = 5e-32 Identities = 361/533 (68%), Gaps = 37/533 (7%) Strand=Plus/Plus Query 52326 GTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCG-- 52383 || || ||| ||||||| ||||| | ||||| || |||||| | |||| | Sbjct 3197132 GTTCCCTGCATTCGCAAGAAGGCCGACTGGGCTCTGCGCTGGATCTCG---GACAAGGAG 3197188 Query 52384 -CCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGC 52442 |||| | || ||||| | || || ||||| || ||||| | || || || ||| Sbjct 3197189 TCCACCTTTGCTCAGCGCCTTGTCGCATTCGCTGCCGTTGAGGGTATCTTCTTCTCTGGC 3197248 Query 52443 AGCTTTGCCGCCATCTTTTACATTAA--AACGAAAGGCATAATGCCCGGCCTGACGTTCA 52500 |||||| | ||||| | | || |||| || | ||||| ||| |||| ||| Sbjct 3197249 TCTTTTGCCTCTATCTTCTGGTTGAAGAAACGT--GGTTTGATGCCTGGCTTGACCTTCT 3197306 Query 52501 GCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGC---CTCTACT 52557 ||||||| | || || || ||||| || || ||||| |||||||| ||| |||| || Sbjct 3197307 CCAACGAGCTTATCTCTCGTGACGAGGGTCTTCACACCGACTTTGCCTGCTTGCTCTTCT 3197366 Query 52558 AC------AAGACGCG-CGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTC 52610 | || | || | | || || ||| ||| | | || ||| | |||| Sbjct 3197367 CCCACCTCAACAACCGTCCTAGCCCCAAGATT--ATT-GAAGAC-ATCAT-----TGTT- 3197416 Query 52611 AAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTG 52670 || || || || || ||| | || || || || | ||| || || || |||| Sbjct 3197417 ---GACGCCGTTGCCATTGAACAAGAATTCTTGACCGACGCTCTTCCCTGCGCTTTGCTC 3197473 Query 52671 GGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTG 52730 || |||||| || ||| |||||| ||||||||||||| || || || ||||| ||||| Sbjct 3197474 GGAATGAACTCGAAGTTGATGTGCCAGTACATCGAGTTCGTTGCTGACCGTCTCTTGGTT 3197533 Query 52731 CAGCTCG-GGCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACA 52788 |||| |||| | | ||||||| |||||| ||| || ||||| || ||| | |||| Sbjct 3197534 --GCTCTTGGCAACAAGAAGTACTACAACGCCACCAACCCCTTTGACTTCATGGAGAACA 3197591 Query 52789 TTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTATAAG 52841 | || |||| |||||||||||||| ||||||||||| || || || ||| || Sbjct 3197592 TCTCTCTTGCCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTATCAG 3197644 >seq6 Length=3820271 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||| | ||| | || | |||| | || ||||||||||||||||||||| Sbjct 3142826 CCACCTCGGAGACGGAGTACAAGGTGTAGAGTGGATTCCTTTTGAATGTTGTAGTCGGAA 3142767 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| || || ||||| ||||| | | || | ||||| ||||| ||||| Sbjct 3142766 AGAGTACGGCCATCTTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGAGGA 3142707 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||||||||| |||||| || | | || | |||||| | || || || Sbjct 3142706 ATGCCTTCTTTGTCTTGGATTTTGGACTTGACGTTATCGATGGTGTCTGAGGATTCGACT 3142647 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||| || ||||| ||||| || || || || ||||| Sbjct 3142646 TCCAATGTGATCGTCTTTCCAGTGAGAGTCTTAACGAAGATTTGCAT 3142600 Score = 87.8 bits (96), Expect = 2e-12 Identities = 139/196 (71%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || || || || |||||||||||| | ||||| ||||||||| || || || | Sbjct 3142565 GATTCTTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCGTCCTCGAGCTGCTTTCCAGCG 3142506 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| | |||||| ||||| ||||| ||||| || || || ||| | || | || | Sbjct 3142505 AAGATCAAACGCTGCTGGTCAGGAGGGATACCCTCCTTATC-CTGAATCTTGGACTTGAC 3142447 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | |||||| | ||||||||||| | || | || || || || ||||| | Sbjct 3142446 GTTG-TCGATGGTGTCAGAGGACTCCACCTCAAGGGTGATGGTCTTGCCGGTAAGAGTCT 3142388 Query 138599 TTACAAAAATCTGCAT 138614 | ||||| || ||||| Sbjct 3142387 TGACAAAGATTTGCAT 3142372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262344170480