Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07- 18] 9 sequences; 36,512,172 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq6 113 4e-20 seq2 109 5e-19 seq4 95.1 1e-14 seq1 86.0 6e-12 >seq6 Length=3820271 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | |||||| || | || ||||| || || || |||||||| Sbjct 3143054 CCACCGCGGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGAA 3142995 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| ||||| || || ||||| | |||||||||||||| ||||| || Sbjct 3142994 AGAGTGCGACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCGCTGCTGGTCGGGTGGG 3142935 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||| || |||||| ||| | | || | |||||| | |||||| Sbjct 3142934 ATACCCTCCTTATCTTGGATTTTGCTCTTCACATTGTCAATGGTGTCTGACGATTCGACT 3142875 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || ||||||| || || || ||||||||||| Sbjct 3142874 TCCAATGTGATAGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 3142828 Score = 100 bits (110), Expect = 3e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 126911 TGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGT 126970 |||| || || || |||||||| ||||| ||| | || || ||| || || || Sbjct 3142802 TGTAGAGTGGATTCCTTTTGAATGTTGTAGTCGGAAAGAGTACGGCCATCTTCAAGTTGC 3142743 Query 126971 TTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTC 127030 || |||||| | |||||||||||||| || ||||| ||||| || ||||| |||||| Sbjct 3142742 TTACCAGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCTTCTTTGTCTTGGATTTTG 3142683 Query 127031 TGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTC 127090 ||||| | |||| |||||| | |||||||| | || | ||| || || || Sbjct 3142682 GACTTGACGTTATCGATGGTGTCTGAGGATTCGACTTCCAATGTGATCGTCTTTCCAGTG 3142623 Query 127091 AGAGTTTTTACAAAAATCTGCAT 127113 ||||| || || || || ||||| Sbjct 3142622 AGAGTCTTAACGAAGATTTGCAT 3142600 Score = 96.9 bits (106), Expect = 3e-15 Identities = 135/187 (72%), Gaps = 2/187 (1%) Strand=Plus/Minus Query 126929 TGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAAT 126988 ||||| ||||| || | |||||| || || ||||| || ||||| ||||||| Sbjct 3142271 TGAATGTTGTAGTCAGAAAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATCAAA 3142212 Query 126989 CGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGAC 127047 |||||||| || ||||| ||||||||||||||| || || ||||| |||| |||| Sbjct 3142211 CGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTG-TCGAT 3142153 Query 127048 GGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAAT 127107 ||| || | | ||| || || | ||| | || || || || || || || || || || Sbjct 3142152 GGTATCAGAAGACTCCACCTCAAGGGTGATGGTCTTCCCAGTGAGGGTCTTGACGAAGAT 3142093 Query 127108 CTGCATG 127114 ||||||| Sbjct 3142092 CTGCATG 3142086 >seq2 Length=6009755 Score = 109 bits (120), Expect = 5e-19 Identities = 295/445 (66%), Gaps = 25/445 (6%) Strand=Plus/Plus Query 47146 TCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTACA 47205 |||| ||||| ||| ||||| |||||||||| ||| ||||| | || || | Sbjct 3197211 TCGCATTCGCTGCCGTTGAGGGTATCTTCTTCTCTGGCTCTTTTGCCTCTATCTTCTGGT 3197270 Query 47206 TGAAAACCAAAGGAGTT--ATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGA 47263 |||| | || | ||| ||||| ||| | || || ||||||||| ||||| | || Sbjct 3197271 TGAAGA--AACGTGGTTTGATGCCTGGCTTGACCTTCTCCAACGAGCTTATCTCTCGTGA 3197328 Query 47264 CGAAGGCCTGCACACCAACTTTGCCTGT---CTCTACTACAACACTAGAGTCGATCAAAA 47320 ||| || || |||||| |||||||||| |||| || | || || | ||| Sbjct 3197329 CGAGGGTCTTCACACCGACTTTGCCTGCTTGCTCTTCTCCCACC------TCAA-CAACC 3197381 Query 47321 GTTGGACGTGCCCACCGTCAGCGA---CATGTTTGCCGAAGCCGTCGCCATTGAGATGGA 47377 || | |||| | | || ||| ||| || ||||| |||||||| || Sbjct 3197382 GTCCTAGC--CCCAAGATTATTGAAGACATCATTGTTGACGCCGTTGCCATTGAACAAGA 3197439 Query 47378 GTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAA 47437 || || |||| ||||| ||| |||| | ||||||||| || || ||||| | | Sbjct 3197440 ATTCTTGACCGACGCTCTTCCCTGCGCTTTGCTCGGAATGAACTCGAAGTTGATGTGCCA 3197499 Query 47438 GTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCA 47497 ||||||||| || || || ||||| || | ||| || | ||||| ||| | Sbjct 3197500 GTACATCGAGTTCGTTGCTGACCGTCTCTTGGTTGCTCTTGGCAA---CAAGAAGTACTA 3197556 Query 47498 CACCGAGA---ATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTT 47554 || || | | || || || || ||| | ||||| || || | |||||||||||||| Sbjct 3197557 CAACGCCACCAACCCCTTTGACTTCATGGAGAACATCTCTCTTGCCGGCAAGACCAACTT 3197616 Query 47555 TTTCGAGAAGCGCGTCGGCGAATAT 47579 ||||||||||| || || || ||| Sbjct 3197617 CTTCGAGAAGCGTGTTGGTGACTAT 3197641 >seq4 Length=4274674 Score = 95.1 bits (104), Expect = 1e-14 Identities = 129/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || || || ||||| ||| | |||||| ||| || ||||| ||||| || ||||| Sbjct 2700761 TTCTGGATGTTGTAGTCGGAGAGAGTGCGACCATCTTCAAGCTGCTTTCCGGCAAAGATC 2700820 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045 | |||||||| ||||| || || |||||||||||| ||| || ||||| | ||| Sbjct 2700821 AGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 2700880 Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 127105 | |||||| | |||||| |||| ||| | || ||||| || || || || || ||| Sbjct 2700881 ATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAA 2700940 >seq1 Length=7684667 Score = 86.0 bits (94), Expect = 6e-12 Identities = 188/279 (67%), Gaps = 2/279 (1%) Strand=Plus/Plus Query 147274 TAGATGCCGTCGATGCTGTCTTCCTTGATGCATTGCAGGAAACACGAACACATTTGGGGA 147333 ||||| || || |||||||||||||| ||| ||||| || ||| | || || Sbjct 4026957 TAGATACCCTCAATGCTGTCTTCCTTCATGTCCACAAGGAAGCAAGAAGCAAGCTGTGGT 4027016 Query 147334 CGACACGTGCCCGCCGCAAACAGCGTGGGGCTGGCGTGCGTGAACGTGCCCAGACTCATC 147393 ||| || || || |||| ||||| ||||| ||||| | || |||| Sbjct 4027017 CGAGGAGTACCTGCGTTGAACAAAGTGGGAGACGCGTGTGTGAAGTATTTCTGAGACATC 4027076 Query 147394 AATTGATACGTTTCAATGGCGCTCATAACGTCATCGCCGTGAATGGCCAGGGCGACGCGC 147453 || | || || |||||||| || | || ||||||||||| | | ||| || ||| Sbjct 4027077 AAGTTGTATGTCTCAATGGCTTTCTCGATGTTCTCGCCGTGAATACCAACGGCAACACGC 4027136 Query 147454 ATGAGCATGTGCTGGGGTCGTTCCGCAATCACGTCATTGACTTTTAATAGATATCCATTG 147513 |||| |||||| ||||| ||||| |||| | | |||||| | | | || || | | Sbjct 4027137 ATGATCATGTGTTGGGGACGTTCGGCAACCTTGCCATTGATTCTGAGGAGGTA-GGAGCG 4027195 Query 147514 GTC-AGAGTTTTGAAACCAAAGTACTTGTAGTCGTAGTC 147551 || ||||| |||||||| ||||| | |||| | |||| Sbjct 4027196 TTCGAGAGTCTTGAAACCGAAGTATTGATAGTTGAAGTC 4027234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500746506160