Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07-
18] 9 sequences; 36,512,172 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq6 113 4e-20
seq2 109 5e-19
seq4 95.1 1e-14
seq1 86.0 6e-12
>seq6
Length=3820271
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|||||||| | || | |||||| || | || ||||| || || || ||||||||
Sbjct 3143054 CCACCGCGGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGAA 3142995
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| |||||| ||| ||||| || || ||||| | |||||||||||||| ||||| ||
Sbjct 3142994 AGAGTGCGACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCGCTGCTGGTCGGGTGGG 3142935
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| |||||||| || |||||| ||| | | || | |||||| | ||||||
Sbjct 3142934 ATACCCTCCTTATCTTGGATTTTGCTCTTCACATTGTCAATGGTGTCTGACGATTCGACT 3142875
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | || || ||||||| || || || |||||||||||
Sbjct 3142874 TCCAATGTGATAGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 3142828
Score = 100 bits (110), Expect = 3e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 126911 TGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGT 126970
|||| || || || |||||||| ||||| ||| | || || ||| || || ||
Sbjct 3142802 TGTAGAGTGGATTCCTTTTGAATGTTGTAGTCGGAAAGAGTACGGCCATCTTCAAGTTGC 3142743
Query 126971 TTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTC 127030
|| |||||| | |||||||||||||| || ||||| ||||| || ||||| ||||||
Sbjct 3142742 TTACCAGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCTTCTTTGTCTTGGATTTTG 3142683
Query 127031 TGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTC 127090
||||| | |||| |||||| | |||||||| | || | ||| || || ||
Sbjct 3142682 GACTTGACGTTATCGATGGTGTCTGAGGATTCGACTTCCAATGTGATCGTCTTTCCAGTG 3142623
Query 127091 AGAGTTTTTACAAAAATCTGCAT 127113
||||| || || || || |||||
Sbjct 3142622 AGAGTCTTAACGAAGATTTGCAT 3142600
Score = 96.9 bits (106), Expect = 3e-15
Identities = 135/187 (72%), Gaps = 2/187 (1%)
Strand=Plus/Minus
Query 126929 TGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAAT 126988
||||| ||||| || | |||||| || || ||||| || ||||| |||||||
Sbjct 3142271 TGAATGTTGTAGTCAGAAAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATCAAA 3142212
Query 126989 CGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGAC 127047
|||||||| || ||||| ||||||||||||||| || || ||||| |||| ||||
Sbjct 3142211 CGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTG-TCGAT 3142153
Query 127048 GGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAAT 127107
||| || | | ||| || || | ||| | || || || || || || || || || ||
Sbjct 3142152 GGTATCAGAAGACTCCACCTCAAGGGTGATGGTCTTCCCAGTGAGGGTCTTGACGAAGAT 3142093
Query 127108 CTGCATG 127114
|||||||
Sbjct 3142092 CTGCATG 3142086
>seq2
Length=6009755
Score = 109 bits (120), Expect = 5e-19
Identities = 295/445 (66%), Gaps = 25/445 (6%)
Strand=Plus/Plus
Query 47146 TCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTACA 47205
|||| ||||| ||| ||||| |||||||||| ||| ||||| | || || |
Sbjct 3197211 TCGCATTCGCTGCCGTTGAGGGTATCTTCTTCTCTGGCTCTTTTGCCTCTATCTTCTGGT 3197270
Query 47206 TGAAAACCAAAGGAGTT--ATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGA 47263
|||| | || | ||| ||||| ||| | || || ||||||||| ||||| | ||
Sbjct 3197271 TGAAGA--AACGTGGTTTGATGCCTGGCTTGACCTTCTCCAACGAGCTTATCTCTCGTGA 3197328
Query 47264 CGAAGGCCTGCACACCAACTTTGCCTGT---CTCTACTACAACACTAGAGTCGATCAAAA 47320
||| || || |||||| |||||||||| |||| || | || || | |||
Sbjct 3197329 CGAGGGTCTTCACACCGACTTTGCCTGCTTGCTCTTCTCCCACC------TCAA-CAACC 3197381
Query 47321 GTTGGACGTGCCCACCGTCAGCGA---CATGTTTGCCGAAGCCGTCGCCATTGAGATGGA 47377
|| | |||| | | || ||| ||| || ||||| |||||||| ||
Sbjct 3197382 GTCCTAGC--CCCAAGATTATTGAAGACATCATTGTTGACGCCGTTGCCATTGAACAAGA 3197439
Query 47378 GTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAA 47437
|| || |||| ||||| ||| |||| | ||||||||| || || ||||| | |
Sbjct 3197440 ATTCTTGACCGACGCTCTTCCCTGCGCTTTGCTCGGAATGAACTCGAAGTTGATGTGCCA 3197499
Query 47438 GTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCA 47497
||||||||| || || || ||||| || | ||| || | ||||| ||| |
Sbjct 3197500 GTACATCGAGTTCGTTGCTGACCGTCTCTTGGTTGCTCTTGGCAA---CAAGAAGTACTA 3197556
Query 47498 CACCGAGA---ATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTT 47554
|| || | | || || || || ||| | ||||| || || | ||||||||||||||
Sbjct 3197557 CAACGCCACCAACCCCTTTGACTTCATGGAGAACATCTCTCTTGCCGGCAAGACCAACTT 3197616
Query 47555 TTTCGAGAAGCGCGTCGGCGAATAT 47579
||||||||||| || || || |||
Sbjct 3197617 CTTCGAGAAGCGTGTTGGTGACTAT 3197641
>seq4
Length=4274674
Score = 95.1 bits (104), Expect = 1e-14
Identities = 129/180 (72%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985
|| || || ||||| ||| | |||||| ||| || ||||| ||||| || |||||
Sbjct 2700761 TTCTGGATGTTGTAGTCGGAGAGAGTGCGACCATCTTCAAGCTGCTTTCCGGCAAAGATC 2700820
Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045
| |||||||| ||||| || || |||||||||||| ||| || ||||| | |||
Sbjct 2700821 AGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 2700880
Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 127105
| |||||| | |||||| |||| ||| | || ||||| || || || || || |||
Sbjct 2700881 ATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAA 2700940
>seq1
Length=7684667
Score = 86.0 bits (94), Expect = 6e-12
Identities = 188/279 (67%), Gaps = 2/279 (1%)
Strand=Plus/Plus
Query 147274 TAGATGCCGTCGATGCTGTCTTCCTTGATGCATTGCAGGAAACACGAACACATTTGGGGA 147333
||||| || || |||||||||||||| ||| ||||| || ||| | || ||
Sbjct 4026957 TAGATACCCTCAATGCTGTCTTCCTTCATGTCCACAAGGAAGCAAGAAGCAAGCTGTGGT 4027016
Query 147334 CGACACGTGCCCGCCGCAAACAGCGTGGGGCTGGCGTGCGTGAACGTGCCCAGACTCATC 147393
||| || || || |||| ||||| ||||| ||||| | || ||||
Sbjct 4027017 CGAGGAGTACCTGCGTTGAACAAAGTGGGAGACGCGTGTGTGAAGTATTTCTGAGACATC 4027076
Query 147394 AATTGATACGTTTCAATGGCGCTCATAACGTCATCGCCGTGAATGGCCAGGGCGACGCGC 147453
|| | || || |||||||| || | || ||||||||||| | | ||| || |||
Sbjct 4027077 AAGTTGTATGTCTCAATGGCTTTCTCGATGTTCTCGCCGTGAATACCAACGGCAACACGC 4027136
Query 147454 ATGAGCATGTGCTGGGGTCGTTCCGCAATCACGTCATTGACTTTTAATAGATATCCATTG 147513
|||| |||||| ||||| ||||| |||| | | |||||| | | | || || | |
Sbjct 4027137 ATGATCATGTGTTGGGGACGTTCGGCAACCTTGCCATTGATTCTGAGGAGGTA-GGAGCG 4027195
Query 147514 GTC-AGAGTTTTGAAACCAAAGTACTTGTAGTCGTAGTC 147551
|| ||||| |||||||| ||||| | |||| | ||||
Sbjct 4027196 TTCGAGAGTCTTGAAACCGAAGTATTGATAGTTGAAGTC 4027234
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475500746506160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |