Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07-
18] 9 sequences; 36,512,172 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq1 127 2e-24
seq6 113 4e-20
>seq1
Length=7684667
Score = 127 bits (140), Expect = 2e-24
Identities = 562/873 (64%), Gaps = 29/873 (3%)
Strand=Plus/Minus
Query 122898 AAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGC 122957
||||| ||||||||| ||||| ||| ||||||| || || | || | ||||| ||
Sbjct 4027168 AAGGTTGCCGAACGTCCCCAACACATGATCATGCGTGTTGCCGTTGGTATTCACGG-CGA 4027110
Query 122958 GA-CATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGC 123016
|| |||||| || || | || || ||| | ||||||||||| |||| ||||| |||||
Sbjct 4027109 GAACATCGAGAAAGCCATTGAGACATACAACTTGATGTCTCAGAAATACTTCACACACGC 4027050
Query 123017 GAGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCT 123076
| ||||||||||||| ||| || || || ||| | |||| || || | |
Sbjct 4027049 GTCTCCCACTTTGTTCAACGCAGGTACTCCTCGACCACAGCTTGCTTCTTGCTTCCTTGT 4026990
Query 123077 CACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGA-TTGCGCGTTGA 123135
| || ||||||||||| ||||||||||| ||| | | || || || |||
Sbjct 4026989 GGACATGAAGGAAGACAGCATTGAGGGTATCTATGATACTCT-CAAGACATGTGCAATGA 4026931
Query 123136 TTTCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGAAGCC 123195
| ||||| | || ||| || || || | || || ||| | | | | || |
Sbjct 4026930 TCTCCAAGTCTGCCGGTGGTATTGGTCTCAATGTCCACCGCATCCGTTCCACTGGTTCCT 4026871
Query 123196 GCATCAGAAGCACCGACGGAATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTTACAATA 123255
|||| || | ||| | || | | ||| || | | ||||| |||| | ||| |
Sbjct 4026870 ACATCGGAGGAACCAATGGTACTTCAAACGGTCTTGTGCCTATGCTCAGAGTGTTCAACA 4026811
Query 123256 ACGCCGTGCGGCACGTCGACCAGGGCGG---CAAACGCAAAGGCGCGATGGCGATCTATC 123312
|| ||| | |||||||||| || || ||| ||| || ||| | || ||||| |
Sbjct 4026810 ACACCGCCAGATACGTCGACCAAGGAGGTAACAAGCGCCCTGGTGCGTTTGCTATCTACC 4026751
Query 123313 TAGAACCGTGGCACGTTGATGTGTACGA-TTTTTTAAATTTAAAACGCAACATGGGGGCG 123371
| || || |||||| ||||| | || || || | || | | | ||| ||
Sbjct 4026750 TCGAGCCCTGGCACTCGGATGTTTTTGAGTTCCTTGACCTTCGCAAGAACCAT-GGCAAA 4026692
Query 123372 GAAGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCGA 123431
|||||| ||||| ||| |||| || || || ||| || ||| | || |||||
Sbjct 4026691 GAAGAAGTCCGTGCCCGTGATCTGTTCTATGCCTTGTGGACCCCTGATCTCTTCATGCGT 4026632
Query 123432 CGCGTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGATC--GGTGTCCCGGCTTGA 123489
|| ||| ||| | || | ||| | | | || ||| | | || ||| | ||||
Sbjct 4026631 CGTGTAGAAGCCAACCAGGACTGGACATTGTTCTG-CCCTAACGAGGCTTCCGGTCTTG- 4026574
Query 123490 GCGACGTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAAGGCAAAC 123549
|||||| |||||| | ||||||| | ||||||| | | |||||| | ||||| |
Sbjct 4026573 CCGACGTCTACGGCGAAGAGTTTGATGCTTTGTACGAGAAGTACGAGAGGGAAGG---TC 4026517
Query 123550 AGGTTAGTCAGGTTCCGGCACG--TGATTTGTTC---AAATTTATTATCGAAACACAAGT 123604
| | ||| || ||| || | | | | || | || |||| | ||
Sbjct 4026516 GTGGTCGTC--GTACCGTCAAGGCTCAGAAGCTCTGGTACGCCATCCTCGAGGCTCAGAC 4026459
Query 123605 CGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAG 123664
|| || || | |||| |||||||||||| || || ||||||| ||| | ||| || |
Sbjct 4026458 TGAGACTGGTAACCCGTTCATGCTCTACAAGGATGCTTGCAACAAGAAGAGCAACCAAAA 4026399
Query 123665 CAACTTGGGAACAATAAAATGTAGT---AATCTTTGCTCCGAAATTATCGAATACAGCGA 123721
||| | || || || ||||| || || ||| | || ||||| |||||| | |
Sbjct 4026398 GAACCTCGGTACTAT---CCGTAGTTCCAACCTCTGCACAGAGATTATTGAATACTGTGC 4026342
Query 123722 TGCCGATCAAGTGGCCGTGTGTAATTTGGCTTC 123754
| | ||| | || || || || |||||||||||
Sbjct 4026341 TCCTGATGAGGTTGCTGTCTGCAATTTGGCTTC 4026309
>seq6
Length=3820271
Score = 113 bits (124), Expect = 4e-20
Identities = 165/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | | || || || || || ||||||||||| || || || |||
Sbjct 3142829 ATACCACCTCGGAGACGGAGTACAAGGTGTAGAGTGGATTCCTTTTGAATGTTGTAGTCG 3142770
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| || ||| || | ||| || || ||| | |||||||| |||||||| ||
Sbjct 3142769 GAAAGAGTACGGCCATCTTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGA 3142710
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|||||||||||||| ||||| ||||| |||| || | || | |||||| || || ||
Sbjct 3142709 GGAATGCCTTCTTTGTCTTGGATTTTGGACTTGA-CGTTATCGATGGTGTCTGAGGATTC 3142651
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|||||| | || | ||| || || || ||||| || || || ||||||||
Sbjct 3142650 GACTTCCAATGTGATCGTCTTTCCAGTGAGAGTCTTAACGAAGATTTGCAT 3142600
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452003149149640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |