Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20pinophilus_20[genbank_20GCA_5F001571465.2_202017-07- 18] 9 sequences; 36,512,172 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1 127 2e-24 seq6 113 4e-20 >seq1 Length=7684667 Score = 127 bits (140), Expect = 2e-24 Identities = 562/873 (64%), Gaps = 29/873 (3%) Strand=Plus/Minus Query 122898 AAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGC 122957 ||||| ||||||||| ||||| ||| ||||||| || || | || | ||||| || Sbjct 4027168 AAGGTTGCCGAACGTCCCCAACACATGATCATGCGTGTTGCCGTTGGTATTCACGG-CGA 4027110 Query 122958 GA-CATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGC 123016 || |||||| || || | || || ||| | ||||||||||| |||| ||||| ||||| Sbjct 4027109 GAACATCGAGAAAGCCATTGAGACATACAACTTGATGTCTCAGAAATACTTCACACACGC 4027050 Query 123017 GAGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCT 123076 | ||||||||||||| ||| || || || ||| | |||| || || | | Sbjct 4027049 GTCTCCCACTTTGTTCAACGCAGGTACTCCTCGACCACAGCTTGCTTCTTGCTTCCTTGT 4026990 Query 123077 CACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGA-TTGCGCGTTGA 123135 | || ||||||||||| ||||||||||| ||| | | || || || ||| Sbjct 4026989 GGACATGAAGGAAGACAGCATTGAGGGTATCTATGATACTCT-CAAGACATGTGCAATGA 4026931 Query 123136 TTTCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGAAGCC 123195 | ||||| | || ||| || || || | || || ||| | | | | || | Sbjct 4026930 TCTCCAAGTCTGCCGGTGGTATTGGTCTCAATGTCCACCGCATCCGTTCCACTGGTTCCT 4026871 Query 123196 GCATCAGAAGCACCGACGGAATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTTACAATA 123255 |||| || | ||| | || | | ||| || | | ||||| |||| | ||| | Sbjct 4026870 ACATCGGAGGAACCAATGGTACTTCAAACGGTCTTGTGCCTATGCTCAGAGTGTTCAACA 4026811 Query 123256 ACGCCGTGCGGCACGTCGACCAGGGCGG---CAAACGCAAAGGCGCGATGGCGATCTATC 123312 || ||| | |||||||||| || || ||| ||| || ||| | || ||||| | Sbjct 4026810 ACACCGCCAGATACGTCGACCAAGGAGGTAACAAGCGCCCTGGTGCGTTTGCTATCTACC 4026751 Query 123313 TAGAACCGTGGCACGTTGATGTGTACGA-TTTTTTAAATTTAAAACGCAACATGGGGGCG 123371 | || || |||||| ||||| | || || || | || | | | ||| || Sbjct 4026750 TCGAGCCCTGGCACTCGGATGTTTTTGAGTTCCTTGACCTTCGCAAGAACCAT-GGCAAA 4026692 Query 123372 GAAGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCGA 123431 |||||| ||||| ||| |||| || || || ||| || ||| | || ||||| Sbjct 4026691 GAAGAAGTCCGTGCCCGTGATCTGTTCTATGCCTTGTGGACCCCTGATCTCTTCATGCGT 4026632 Query 123432 CGCGTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGATC--GGTGTCCCGGCTTGA 123489 || ||| ||| | || | ||| | | | || ||| | | || ||| | |||| Sbjct 4026631 CGTGTAGAAGCCAACCAGGACTGGACATTGTTCTG-CCCTAACGAGGCTTCCGGTCTTG- 4026574 Query 123490 GCGACGTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAAGGCAAAC 123549 |||||| |||||| | ||||||| | ||||||| | | |||||| | ||||| | Sbjct 4026573 CCGACGTCTACGGCGAAGAGTTTGATGCTTTGTACGAGAAGTACGAGAGGGAAGG---TC 4026517 Query 123550 AGGTTAGTCAGGTTCCGGCACG--TGATTTGTTC---AAATTTATTATCGAAACACAAGT 123604 | | ||| || ||| || | | | | || | || |||| | || Sbjct 4026516 GTGGTCGTC--GTACCGTCAAGGCTCAGAAGCTCTGGTACGCCATCCTCGAGGCTCAGAC 4026459 Query 123605 CGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAG 123664 || || || | |||| |||||||||||| || || ||||||| ||| | ||| || | Sbjct 4026458 TGAGACTGGTAACCCGTTCATGCTCTACAAGGATGCTTGCAACAAGAAGAGCAACCAAAA 4026399 Query 123665 CAACTTGGGAACAATAAAATGTAGT---AATCTTTGCTCCGAAATTATCGAATACAGCGA 123721 ||| | || || || ||||| || || ||| | || ||||| |||||| | | Sbjct 4026398 GAACCTCGGTACTAT---CCGTAGTTCCAACCTCTGCACAGAGATTATTGAATACTGTGC 4026342 Query 123722 TGCCGATCAAGTGGCCGTGTGTAATTTGGCTTC 123754 | | ||| | || || || || ||||||||||| Sbjct 4026341 TCCTGATGAGGTTGCTGTCTGCAATTTGGCTTC 4026309 >seq6 Length=3820271 Score = 113 bits (124), Expect = 4e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || || || || || ||||||||||| || || || ||| Sbjct 3142829 ATACCACCTCGGAGACGGAGTACAAGGTGTAGAGTGGATTCCTTTTGAATGTTGTAGTCG 3142770 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || ||| || | ||| || || ||| | |||||||| |||||||| || Sbjct 3142769 GAAAGAGTACGGCCATCTTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGA 3142710 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 |||||||||||||| ||||| ||||| |||| || | || | |||||| || || || Sbjct 3142709 GGAATGCCTTCTTTGTCTTGGATTTTGGACTTGA-CGTTATCGATGGTGTCTGAGGATTC 3142651 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||| | || | ||| || || || ||||| || || || |||||||| Sbjct 3142650 GACTTCCAATGTGATCGTCTTTCCAGTGAGAGTCTTAACGAAGATTTGCAT 3142600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452003149149640